Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00314 ATGGCACACATTCGATATATGGCGAATTTGCCCCAATCGAGCAACGCCGCCAACAAGAATCACAAGATGGCGTTAGTGGAAAAACTTGTTCTCGAACTGAGTAACCCCGATCTCCGTGAAAACGCTCTTGTTGAGCTCTCCAAGGAAATAACTTCAATATACCGTTTTCTTTCCCCACCAAATCTTAGTAAAGAACAACCAGATCGAGTATTCCAGGTTATTGTTCTACTTCAGAAAGTGGCATCTCACCCTGATACAAAGATGCTATTCCTCCATGCTGGCATACCTCTATATCTGTATCCCTTCCTAAATACAACAAGCAAGTCAAGACCATTTGAGAATTTGAGGATCTACAGTCTTGCTGTCATGGCTGTCTTGGTGCAGGTTGATGACACAGACGTTATAGGTTTCTTTCTTTCTACAGAGATAATGCCTCTGTGCCTGCGCGCTATGGAAATCGGCAGTGAATTGTCAAAAACTATTGCAACATATATAGTTCGTAAAATTCTGTTGGACGAAGTTGGTTTGGAATATGTTCGTGCAACAGCGGATCGCTATTTTGCAGTATGTCAAGTTTTGAGGAACATGGAGGCAAGTCTTGTTGAGCAACCTTCACGTCGTCTTCGGAAGTTAATTGGTCAATGTTATCATCGTCTGTCAAACTATCCGAGGTTGGTTAAGTAA 684 0.4225 MAHIRYMANLPQSSNAANKNHKMALVEKLVLELSNPDLRENALVELSKEITSIYRFLSPPNLSKEQPDRVFQVIVLLQKVASHPDTKMLFLHAGIPLYLYPFLNTTSKSRPFENLRIYSLAVMAVLVQVDDTDVIGFFLSTEIMPLCLRAMEIGSELSKTIATYIVRKILLDEVGLEYVRATADRYFAVCQVLRNMEASLVEQPSRRLRKLIGQCYHRLSNYPRLVK* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00314 227 Gene3D - 17 227 IPR011989 -
Rops9g00314 227 SUPERFAMILY ARM repeat 34 201 IPR016024 -
Rops9g00314 227 PANTHER UNCHARACTERIZED 19 225 IPR007216 GO:0006402|GO:0030014
Rops9g00314 227 Pfam Cell differentiation family, Rcd1-like 46 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00314 Rops-Chr9 3966117 3970137 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Rops9g00314 Rcd1 5.2e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00314 K12606 - han:110873600 272.707