Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00305 ATGTCGGCATCAGAGATTCTTCGAGAACTGCAATCACTCAAGGACCAAAAGAGCAAAATCGAGCACAAAATCTCTACGCTCGAAGCTCAACTGAGGGAGATTAATCTCCAAAACGACGCCGTTTCCAATGGCTCTTCATCATCATCGTACCCCACCAACGGATTGGAGCCTCACATGATTCACAGATATAGTCGTCACCTTGTCCTTCCTTCCTTTGGTGTTCAAGGGCAGGCAAATCTCTTGAAGTCATCAATTTTAGTAGTGGGAGCTGGAGGATTGGGTGCTCCTGCTTTGTTATACTTTGCAGCTTGTGGTGTTGGCCGTTTGGGTATTATTGATCATGACAAGGTTGAGCTCAATAACATGCATAGACAGATTATCCACACGGAAGCATATATTGGTCAGCCGAAAGTGAAATCTGCTGCTGCTGCTTGTCGATCGGTCAACTCCTCTATCCAAGTTGTGGAACATGAAGAAGCTTTGCGGACTTCCAATGCTTTGGAAATTTTCAGCAAATATGATATAATAGTAGATGCAACAGATAATGCTCCTACCCGGTATTTGATCAGTGATTGCTGTGTGGTACTAGGAAAGCCTCTTGTATCAGGTGCTGCACTGGGATTGGAAGGGCAGCTCACCGTCTACAATTACAACGGTGGTCCTTGCTATCGATGCCTCTTTCCGACTCCACCACCTAGAACAGCATGCCAAAGTTGCGCTGATGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTCTCCAAGCTCTCGAGGCTATTAAGATTGCAGCTTCTGTTGGTGAACCACTGTCAGGAAGGATGCTTCTCTTTGATGCATTGGCTGGACGGATTCGTGTTGTCAAAATTAGAGGAAGGTCTTTGCAATGTGAAGCTTGTGGAGGAAATTCAACATTTACTCAGCAGCACCTCCGAGAATTTGATTATGAGAAGTTCACTCAGACTCCCTTGTGCGTGCCTCCTGTGAAGTTAAATCTACTTCCAGCTGAATCAAGAATCAGCAGCAAGGAGTACAGTGAAATAATTCATAACAAGGAACCACATGTTCTGGTTGATGTTAGACCAGCTCACCATTTCAAGATTGTATCTCTCCCCAAGTCCCTTAACATTCCACTGTCAACTTTAGAGGCTAGGTTGCCTGAAATATCATCAGCTTTGAAGAAAGAGGAAGAGGACAAAGGTGTGGTTTCTGGATCAAGTGCCCAATTGTATGTAGTATGCAGAAGAGGAAATGATTCTCAAAGGGCTGTTCAATGCCTTCAGAAAATAGGTTTCACTTCTGCCAAGGATATTGTTGGGGGCTTAGAGTCTTGGGCACACAATGTGGATCCTAACTTCCCTACATATTAG 1371 0.4464 MSASEILRELQSLKDQKSKIEHKISTLEAQLREINLQNDAVSNGSSSSSYPTNGLEPHMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAACGVGRLGIIDHDKVELNNMHRQIIHTEAYIGQPKVKSAAAACRSVNSSIQVVEHEEALRTSNALEIFSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPRTACQSCADGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLFDALAGRIRVVKIRGRSLQCEACGGNSTFTQQHLREFDYEKFTQTPLCVPPVKLNLLPAESRISSKEYSEIIHNKEPHVLVDVRPAHHFKIVSLPKSLNIPLSTLEARLPEISSALKKEEEDKGVVSGSSAQLYVVCRRGNDSQRAVQCLQKIGFTSAKDIVGGLESWAHNVDPNFPTY* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00305 456 Gene3D - 338 456 IPR036873 -
Rops9g00305 456 SMART rhod_4 341 451 IPR001763 -
Rops9g00305 456 Pfam Rhodanese-like domain 343 446 IPR001763 -
Rops9g00305 456 Coils Coil 379 399 - -
Rops9g00305 456 FunFam Adenylyltransferase and sulfurtransferase MOCS3 56 305 - -
Rops9g00305 456 FunFam Adenylyltransferase and sulfurtransferase MOCS3 338 456 - -
Rops9g00305 456 Gene3D - 57 306 - -
Rops9g00305 456 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 58 423 IPR035985 GO:0008641
Rops9g00305 456 Coils Coil 3 37 - -
Rops9g00305 456 CDD ThiF_MoeB_HesA_family 62 290 - -
Rops9g00305 456 Pfam ThiF family 63 298 IPR000594 -
Rops9g00305 456 ProSiteProfiles Rhodanese domain profile. 351 454 IPR001763 -
Rops9g00305 456 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 58 307 IPR045886 -
Rops9g00305 456 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 27 456 IPR028885 GO:0002143|GO:0004792|GO:0005829
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00305 101 456 Sulfurtransferasese or Rhodanese AT5G55130 72.829 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00305 K11996 - gmx:100814736 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00305 9 3882755 3887272 Rops9g00305 9 3882755 3887272 ECH