Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00299 ATGAGTTTGCTTCCTCGACCAATGATTTTCCATCTAATTTTGTTTATCAGCAGCTTTTTTTGTCTTGGTAGAGCCGCTGATTGTGGTGGGAAGAATGTTGCAAATACCATCACTGTCAATCAAAATGGTAAAGGAGCATCCAAAGCGATTCAAGCTGCCATTGATTCCATAAAGAACAATAATGATCGATGGGTCAAGATTCACATAAATCCTGGCACATACGTGGAAAAGGTTCATATTCCCATAGAAAAGCCATGCATCATTTTAGAAGGAACTGGTAGCGAAAGCACAATCATTAGTTTCGGTGATCACATATCAACCTCCTCGAGCGCTACATTCACTGCATCCCCACCTAATGTGGTTGTGAATGGCATTACCTTCAAGAACTCATATAATTTGAATACTGCAGCGAGAACAGTACCAGCAGTGGCAGCTGCAGTATATGGAGACAAAACTTCCTTCTCAAAGTGTAGTTTCATCGGTTTTCAAGACACTGTGTTTGATATAAGGGGACGTCATTACTATAAAGATTGCTACATTCAAGGTGAAGTGGACTTCATTTGTGGTTCTGGCCAATCTTATTTTGAGAATTGCACGATCAACGCCACAAAGGGGAATTCTAGAAAAGCTCCAGGTTATATCACAGCCCAACACAGGAATTCTCCAAATGACCCAAATGGTTTTGTTTTTGAGAGAGGTTACGTTGTTGGAAGTGGTCAAGTGAATCTAGGAAGAGCATGGGGCCCTTTCTCTAGAGTTATATTCATTGGAACAAATTTTTCTTCAGTGGTGACTCCTCAAGGATGGAGTGCTTGGAATTTCGCTGGCCACGAGTAG 837 0.4134 MSLLPRPMIFHLILFISSFFCLGRAADCGGKNVANTITVNQNGKGASKAIQAAIDSIKNNNDRWVKIHINPGTYVEKVHIPIEKPCIILEGTGSESTIISFGDHISTSSSATFTASPPNVVVNGITFKNSYNLNTAARTVPAVAAAVYGDKTSFSKCSFIGFQDTVFDIRGRHYYKDCYIQGEVDFICGSGQSYFENCTINATKGNSRKAPGYITAQHRNSPNDPNGFVFERGYVVGSGQVNLGRAWGPFSRVIFIGTNFSSVVTPQGWSAWNFAGHE* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00299 278 Gene3D - 30 278 IPR012334 -
Rops9g00299 278 Pfam Pectinesterase 37 273 IPR000070 GO:0030599|GO:0042545
Rops9g00299 278 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 277 - -
Rops9g00299 278 SUPERFAMILY Pectin lyase-like 33 273 IPR011050 -
Rops9g00299 278 FunFam Pectinesterase 31 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00299 Rops-Chr9 3794039 3795132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00299 10 278 Carbohydrate Esterase AT2G19150 47.059 1.23e-77 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00299 - - lang:109328531 340.117