Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00286 ATGTCAATGCTTCCTTCACTCACAAACCCAAATGAGCTTCTCTCATCCTCTTCGTTCTACCACAATGCATTATCTACTTCACCCTCTGCTGTTTCTCTCAACCCCAGAACCACGAGAATTGCTCTTACCCCACAACGGCTCAGTCGTCGTTTTGGGTCAGTGAGATGCTCCTTCGCTTATGTAGATAACGCTAAGATTAAGGTTGTCGGCATTGGGGGTGGTGGCAACAACGCCGTTAACCGCATGATCGGTAGTGGTTTGCAGGGTGTGGACTTCTATGCAGTAAACACTGATGCTCAAGCGCTATTACATTCTGCTGCTGAGAACCCTATTAAAATTGGAGAACTTCTGACTCGTGGATTAGGTACTGGTGGGAATCCACTTTTGGGGGAACAAGCTGCGGAGGAATCAAGAGAAGTTATTGCTGATGCTCTTAAAGGATCAGATTTGGTGTTCATTACAGCTGGGATGGGTGGGGGCACAGGGTCTGGTGCTGCCCCAGTTGTGGCTCAAATATCAAAAGAGGCTGGTTACTTGACTGTAGGTGTTGTTACCTATCCCTTCAGTTTTGAAGGACGTAAAAGATCCTTGCAGGCACTTGAAGCCATTGAAAAGCTTCAGAAAAATGTTGACACGCTTATAGTGATTCCAAATGACCGTCTGCTTGACATAGCTGATGAACAGATGCCTCTTCAGGATGCTTTCCGTCTTGCAGATGATGTTTTACGCCAAGGAGTACAAGGAATATCAGACATTATAACAATACCTGGACTTGTAAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGAACAGCAATGCTTGGAGTAGGTGTTTCATCCGGTAAAAACCGAGCAGAAGAAGCAGCAGAACAGGCTACTTTGGCTCCTTTAATTGGATCATCTATTCAATCGGCAACTGGGGTAGTGTATAATATTACTGGAGGAAAGGACATAACCCTGCAGGAAGTGAACAGGGTGTCTCAGGTGGTGACTAGTTTGGCTGATCCTTCTGCCAATATTATATTTGGTGCTGTTGTTGATGATCGTTACACTGGGGAGATTCATGTGACTATCATTGCAACTGGCTTCTCGCAGTCTTTTCAGAAGAAGCTGCTATCAGATCCAAGGGCTGCTAAACTGCTTGACAAAGTGGCTGAGGGACAAGAAAGCAAGGCAATGCCCCCTCCCCTCAAGTCTTCAAACTTATCTTCCACAGTTGAATCTAAAGCATCCCCGCGAAGGCTCTTTTTTTAG 1266 0.4542 MSMLPSLTNPNELLSSSSFYHNALSTSPSAVSLNPRTTRIALTPQRLSRRFGSVRCSFAYVDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAVNTDAQALLHSAAENPIKIGELLTRGLGTGGNPLLGEQAAEESREVIADALKGSDLVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLSDPRAAKLLDKVAEGQESKAMPPPLKSSNLSSTVESKASPRRLFF* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00286 421 PRINTS Cell division protein FtsZ signature 178 199 IPR003008 GO:0005525
Rops9g00286 421 PRINTS Cell division protein FtsZ signature 241 263 IPR003008 GO:0005525
Rops9g00286 421 PRINTS Cell division protein FtsZ signature 150 170 IPR003008 GO:0005525
Rops9g00286 421 PRINTS Cell division protein FtsZ signature 264 285 IPR003008 GO:0005525
Rops9g00286 421 SUPERFAMILY Tubulin nucleotide-binding domain-like 64 260 IPR036525 -
Rops9g00286 421 NCBIfam cell division protein FtsZ 62 377 IPR000158 GO:0003924|GO:0005525
Rops9g00286 421 CDD FtsZ_type1 78 366 IPR000158 GO:0003924|GO:0005525
Rops9g00286 421 Gene3D Tubulin/FtsZ, GTPase domain 59 272 IPR036525 -
Rops9g00286 421 FunFam Cell division protein FtsZ 1, chloroplastic 230 367 - -
Rops9g00286 421 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 158 164 IPR017975 GO:0005525|GO:0005874|GO:0007017
Rops9g00286 421 SMART Tubulin_4 65 257 IPR003008 GO:0005525
Rops9g00286 421 ProSitePatterns FtsZ protein signature 2. 149 170 IPR020805 GO:0005525
Rops9g00286 421 Pfam FtsZ family, C-terminal domain 274 367 IPR024757 -
Rops9g00286 421 Gene3D - 273 379 IPR037103 -
Rops9g00286 421 MobiDBLite consensus disorder prediction 390 421 - -
Rops9g00286 421 SMART Tubulin_C_4 259 376 IPR018316 -
Rops9g00286 421 Pfam Tubulin/FtsZ family, GTPase domain 65 225 IPR003008 GO:0005525
Rops9g00286 421 SUPERFAMILY Tubulin C-terminal domain-like 259 374 IPR008280 -
Rops9g00286 421 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 60 380 IPR045061 GO:0003924|GO:0005525
Rops9g00286 421 MobiDBLite consensus disorder prediction 398 414 - -
Rops9g00286 421 Hamap Cell division protein FtsZ [ftsZ]. 61 413 IPR000158 GO:0003924|GO:0005525
Rops9g00286 421 FunFam Cell division protein FtsZ 1, chloroplastic 58 272 - -
Rops9g00286 421 ProSitePatterns FtsZ protein signature 1. 96 130 IPR020805 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00286 Rops-Chr9 3547303 3550179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00286 153 361 PP2C-type Phosphatase Gene Family AT1G75010 21.461 8.50e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00286 K03531 - gmx:100808722 707.983