Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00284 ATGTCTTCTTCTTCCTCTTCCTCCTCCTCGTCTTCTTCTTCTTCTGCTGCTGCTGCCGCCGCCGCTGCCGCCAAAAAGTACGATGTGTTTCTTAGCTTCCGAGGTGAGGACACCCGGGTCGGTTTCACCAGCCATCTTTATAATGCTCTGAGTAAGAAATCAATCAGAACATACATAGATAACCAGCTCAATACAGGAGATGATGTTTGGCCAGCACTGGCCAAAGCAATCGAGGACTCCCATGTATCCATTGTTGTTTTCTCGGAAAACTATGCTTCTTCGAAATGGTGCTTGGAAGAACTGGTGAAAATACTCGAATGCAGAAAAGATCAGGGTCAGGTTGTTATACCAGTTTTTTATGAAACAGATCCCTCCCACATAAGGAAGCAAACTGGGAGTTATGAGAAAGCATTCGCCAAACATGAACCTGATCTCACTAACAAAGACAGCGAATCCAATAAACAGAAAGTGTTGAAGTGGAAAGCTGCCCTCACTGAAGCAGCCAATATATCTGGATGGGACTCTCAAACCCATGAGGATGAATCTCACCTGATCGAGAACATCATCAATGATGTATTGCAAAAGCTACACCTGAGGTACCCTACTGAACTGAAAGGCCTTGTGGGAACTGAAAGAAACTGTAGAAACGTGGAATTATTAATGAAAAAAGTTCGAGTAATTGGAATTTGGGGTATGGGTGGAATAGGGAAATCAACCATTGCCAAAGTCTTGTTTGCAAAACTCTTTCCCCAATATGATAATGTGTGCTTCATGGCCAATGCAAAAGAATATTCACTTGATAAGCTTCTCTTTGAGCTTTTAAAGGAAGAAATTTCCAAATCTGTTGGAGGATCCACATTTGATATAAGGAGGCTCAGTGGTAAAAAGGTTCTTGTTGTACTTGATAATGTGGATAGTTTAGATCAAATAGAATATTTGTGTAGAGAGTATGGTGACCTAAGTCAAGATAGTAAACTCATTATAACAACAAGATATAGGCAATTGCTTATTGGAAGAGTTGGTTTGATATACAAGGTCAAGAAATGGAAAACTCCTGAATCTCTAAAGCTTTTTAGCTTAGAAGCCTTCAAGCAAAGCCATCCCCAAAAGGATTATGAGGATCTCTCACAGAAGGCAGTTGATTATGCAGGGGGGCTTCCATTAGCTCTTAAAGTTTTGGGTTCAAATCTACGCTCCAAAAGTACAGATTTTTGGGAAAGTACTTTCAGAAAACTTGACACTTATCCTAATCAGACAATTCAAAAATTGTTGGAAGTTAGCTACGATGAATTAGACCCTCTAGAGCAAAATATATTTTTAGACATTGCATTTTTCTTCAGAGGAAAAAAGAAAGACCATGTCATAAGGATACTGGATGCCTGTGGTTTTGAAGCAAGCAGTGGAATAGAAGTTCTTGAAGACAAAGCTTTGATAACTATCTCGAATAGCAATAGAATACAGATGCATGACTTACTTCAAAAAACGGGTTTGGAAATAGTACGTAAACAATGTGAAAGAAACCCTGGAAGACGTACCCGATTGAGGGATAGTGAAGCTCGTGAAGTAATTGTAGAAAACAAGGGGACTGATTTAATTGAAGCCATAACATTAGATTTGTCTCAAGTTAAAAATTTACCATTGCATGCTGACACATTCACAAAGATGAAGGTCTTAAGATTTCTTAAATTCTCTACCCCCTTGGGTCAGAGTTCTAGTAATACATACCTCGACCTTCCTACAGTTTTTGAGCCATTTTCTGACAAACTGAGGTATTTTGAGTGGAGTGGATACCCCTTTGATTATCTTCCGTCACCTTTTTGTGCTAAGTTTCTTGTTGAGTTTCGCATGCCGCAGAGCAATGTTAAAGAACTCTGGCAGGGGGTACAGGAACTTCATGGATTGGAGGGAATTGACCTGAGTGAATGCAAACAATTTGAATGGCTCCCGGATTTGTCTAAGGCGTCAAGACTTAAATGGGTTAATCTCTCCGGTTGTACAAGTCTGTGGTATCTTCATCCATCTGTTTTATCCTCCGATACACTTGTTACTTTGATACTGGATAGGTGTACAAATCTCAGGAGTGTTAAAGGTGAGAAGCATTTAAAATCTCTGGAGAAGATCAGTGTCAATGGCTGCTTAAGTCTCGAGGAATTTGCAGTGTCCTCGGATATGATTGAAAACTTGGATTTAAGCAACATAGGAATCCAAACATTGGACACTTCAATTGGGCGTCTACACAATCTTAAGTGGCTTAATCTAGAGGGTTTAAGACTCAGGCATCTTCTAAAGGAGTTATCTTGCCTGAAATCTCTCAAGGAATTGAAGCTTTCTGACAGCGGACTAGTAATTGACAAAGAGCAGCTACATGTCTTGTTTGATGGCTTAAGATCCCTCCAAATACTACATTTGAAGGGTTGTAGTAACTTGAGTGAACTCCCTGACAACATCAGTGTCCTATCACAACTACAGGAATTAACGCTAGATGGAAGCAATGTGAAAGGTTTGCCCCAAAGCATGAAGCATCTTGACGAGCTGGAAATTCTGTCCTTGGAGAATTGCAGGGAGCTTTTGTGTCTACCAGAGCTTCCACCCCTCATCAAACTGTTACTTGTAGTTAACTGCACATCATTGGTGTCGGTGTCAAATTTAGAGACTTTGGCAACAAAAATGATGGGAAAGGCCAAACAGATTTCATTTAAAAATAGCTTGAAATTGGACAGGGACTCACTCACTGGTATAATGAAAAGCCTCCATTTAACTATGGAGAGTGCTGCAATTCACAATGTGTTAGTGAGAAGACTCCGTGTGGACGTGCACAGCTACAACTACACAAGTATTGAGGTTTGTTTACCAGGAAGAAGGGTCCCAAGGCAGGTCAAGTATTATCGAACAACTAAGTCCTCCTCCTCCTCCTCCATCACCATCAAACTTCCTAAGCGTTACAACTTGTTGGGCTTCATTTACTCCGTGGTTCTTTCTCCAGCATGTGGAATGAAGAAGCGTGGTACTAAAATAAAGTGTGAATGCCACTTGGCAGAAGGAACAAAGGCTTCATGGCTGAACACTGATATCACGGAACTGAACTCAGATCATGTTTATGTATGGTATGATCCATTCCATTGTGATAGCATTCTCAAGTTTTATGAACCAACAGTTTGTTTCGAGTTCTGTGTTGCAAATGATGCGGGGGAAGTTGATGGTTCAATCTGTATTAAAGAGTGTGGGGTACGCCTCGTGAGGGTCTCAGAATTGCAGACTGTTTTATTGGAATTAGACTTGGATTCGGATAAGAAGAAGAACTTGGAGAAGGGAGTAGAATTAGAAAGCAATGGTTTGAGAAATCAGATCCAGAATCAACCATGGGATTCCAGTGAACACAGTTCCAGTGATAGCATAGACGAATCAGAGTCAGATATGGTCGAACCAGATTCAGCTGAAGAAGGTAATCGGAGAAAATACCGTAATGCTGAGGGCATTAAATCTACTAGCAAGAAAACCAAGATTGGTGATGAAAGAGTTCGTGGGCAGATCACTATCACAGAGTCTCCATATGTGGTTTTGAAACCTTCAATTGTGATCGAAACATTTGAGGTGGATGCACACGACAAGGCAGCTTCTTTTGGCCCTATCGAAGAGGCACAATCAGTTTCAGGTCCCAGTGTTTCTTCTAAGAATGAGAAAGACAAAGTATCTTTGATTCCCTCAGCTAGAGAACCTATCCCTATGGACTTAGACTACATCAACAAACTAATTGACGAAGATCCCATGGGTGCATTGGAGAGCTTCTTGTCGGGGGAAATTTCTGTATCCTCATCGACCATACATAATGAATTTTCGGAAGTTGATAGTGCTCCATGGACTGAGTTGATAAATAATCTGAGAGACTTGGTCGTTGGCAACAGTCTATTTCATCTATTACACAATGATACGATGTCGAATGAAATAAGAGATTTATTAAAGCAAATTGAGAAATACATTGACAAGATGCCTGAAGACCTCGTCTCTGGGGTTACAAAATTTAATGACTTCTACACTGATGTGTTCGAAAACATCAGAAAATATAATGAATGTGTAGAAGAGCAGAAGAAAGCTAGAGCCTCCCACCAAATGGTCTTAAAGCAAATGAAAAAATCAAAGACTGACTTCCAAAAGGTCACAACTCTGATTGATTCGAGTAGCGGAAAACTTGCTTCAATAAATAATCAAGTTGCTGAGCTTGAGAGGAAACTTGTTGAAGTTAAAAAGGAACAATCTTTTTTGCAGTCAATGATGGACAAAAATGAAGAGCAAAATAAAGATGTCATTATGAAGAGTGCCTCTTTGAGTCATGAGGCAAAAAATCTCATCATAAGGATACAAAAGGCAGAAGCTTCCCACAAGACCTTCAATGAAGTTCATCAAAAGCAATCTAATATCTATGAGAAAATGAGGGCTAACCCTCCCTTTTAA 4449 0.4014 MSSSSSSSSSSSSSSAAAAAAAAAKKYDVFLSFRGEDTRVGFTSHLYNALSKKSIRTYIDNQLNTGDDVWPALAKAIEDSHVSIVVFSENYASSKWCLEELVKILECRKDQGQVVIPVFYETDPSHIRKQTGSYEKAFAKHEPDLTNKDSESNKQKVLKWKAALTEAANISGWDSQTHEDESHLIENIINDVLQKLHLRYPTELKGLVGTERNCRNVELLMKKVRVIGIWGMGGIGKSTIAKVLFAKLFPQYDNVCFMANAKEYSLDKLLFELLKEEISKSVGGSTFDIRRLSGKKVLVVLDNVDSLDQIEYLCREYGDLSQDSKLIITTRYRQLLIGRVGLIYKVKKWKTPESLKLFSLEAFKQSHPQKDYEDLSQKAVDYAGGLPLALKVLGSNLRSKSTDFWESTFRKLDTYPNQTIQKLLEVSYDELDPLEQNIFLDIAFFFRGKKKDHVIRILDACGFEASSGIEVLEDKALITISNSNRIQMHDLLQKTGLEIVRKQCERNPGRRTRLRDSEAREVIVENKGTDLIEAITLDLSQVKNLPLHADTFTKMKVLRFLKFSTPLGQSSSNTYLDLPTVFEPFSDKLRYFEWSGYPFDYLPSPFCAKFLVEFRMPQSNVKELWQGVQELHGLEGIDLSECKQFEWLPDLSKASRLKWVNLSGCTSLWYLHPSVLSSDTLVTLILDRCTNLRSVKGEKHLKSLEKISVNGCLSLEEFAVSSDMIENLDLSNIGIQTLDTSIGRLHNLKWLNLEGLRLRHLLKELSCLKSLKELKLSDSGLVIDKEQLHVLFDGLRSLQILHLKGCSNLSELPDNISVLSQLQELTLDGSNVKGLPQSMKHLDELEILSLENCRELLCLPELPPLIKLLLVVNCTSLVSVSNLETLATKMMGKAKQISFKNSLKLDRDSLTGIMKSLHLTMESAAIHNVLVRRLRVDVHSYNYTSIEVCLPGRRVPRQVKYYRTTKSSSSSSITIKLPKRYNLLGFIYSVVLSPACGMKKRGTKIKCECHLAEGTKASWLNTDITELNSDHVYVWYDPFHCDSILKFYEPTVCFEFCVANDAGEVDGSICIKECGVRLVRVSELQTVLLELDLDSDKKKNLEKGVELESNGLRNQIQNQPWDSSEHSSSDSIDESESDMVEPDSAEEGNRRKYRNAEGIKSTSKKTKIGDERVRGQITITESPYVVLKPSIVIETFEVDAHDKAASFGPIEEAQSVSGPSVSSKNEKDKVSLIPSAREPIPMDLDYINKLIDEDPMGALESFLSGEISVSSSTIHNEFSEVDSAPWTELINNLRDLVVGNSLFHLLHNDTMSNEIRDLLKQIEKYIDKMPEDLVSGVTKFNDFYTDVFENIRKYNECVEEQKKARASHQMVLKQMKKSKTDFQKVTTLIDSSSGKLASINNQVAELERKLVEVKKEQSFLQSMMDKNEEQNKDVIMKSASLSHEAKNLIIRIQKAEASHKTFNEVHQKQSNIYEKMRANPPF* 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00284 1482 Gene3D Ribonuclease Inhibitor 481 723 IPR032675 -
Rops9g00284 1482 Gene3D Ribonuclease Inhibitor 724 904 IPR032675 -
Rops9g00284 1482 Pfam TIR domain 26 202 IPR000157 GO:0007165
Rops9g00284 1482 FunFam Disease resistance protein (TIR-NBS-LRR class) 350 432 - -
Rops9g00284 1482 SUPERFAMILY Toll/Interleukin receptor TIR domain 25 173 IPR035897 -
Rops9g00284 1482 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 718 IPR044974 GO:0006952
Rops9g00284 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 442 IPR027417 -
Rops9g00284 1482 SMART till_3 26 170 IPR000157 GO:0007165
Rops9g00284 1482 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Rops9g00284 1482 Coils Coil 1308 1328 - -
Rops9g00284 1482 MobiDBLite consensus disorder prediction 1112 1126 - -
Rops9g00284 1482 Pfam NB-ARC domain 221 432 IPR002182 GO:0043531
Rops9g00284 1482 Gene3D - 197 339 IPR027417 -
Rops9g00284 1482 Coils Coil 1389 1423 - -
Rops9g00284 1482 PRINTS Disease resistance protein signature 291 305 - -
Rops9g00284 1482 PRINTS Disease resistance protein signature 226 241 - -
Rops9g00284 1482 PRINTS Disease resistance protein signature 383 397 - -
Rops9g00284 1482 PRINTS Disease resistance protein signature 840 856 - -
Rops9g00284 1482 MobiDBLite consensus disorder prediction 1112 1167 - -
Rops9g00284 1482 SUPERFAMILY L domain-like 488 861 - -
Rops9g00284 1482 Gene3D - 350 432 IPR042197 -
Rops9g00284 1482 FunFam Disease resistance protein (TIR-NBS-LRR class) 23 198 - -
Rops9g00284 1482 ProSiteProfiles TIR domain profile. 25 196 IPR000157 GO:0007165
Rops9g00284 1482 MobiDBLite consensus disorder prediction 1143 1167 - -
Rops9g00284 1482 Gene3D - 23 196 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00284 Rops-Chr9 3512952 3526812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00284 795 890 WRKY Transcription Factor Family AT4G12020 33.333 1.55e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00284 - - cam:101515491 1464.13