Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g00271 | ATGGTCTGTACAGGAGGTGAGTTATCAGAATCCGAGTCTTTCTTCAATTTCCTTAGGGCTGTTGATTCCAATAATGTACTTAATATTAGTTGGATTGGTTCAACATCACATCCTTGCTTGGTTAAGTTGAATGGTGTAAGATGTAACTTCAATGCTACCAATATTGTAGAGATAAGGCTTGAAAACTTGAACCTTAGTGGCATAATTGATGCAGATTCCCTATGCAGGCTCCAAAAGCTTAGGGTAGTGAGTTTAGCTAAGAATAACATCAGAGGAACTATTCCACATTCAATTTTGCACTGTGCAAGGTTGGTGCATTTGAATTTAACCAGCAATCAATTGAGTGGGAGATTACCAAAGGCTTTGACAAAATTGAAATATCTTGAGAGCTTGGACATATCTAACAACAATTTTTCTGGCATGATCCCAAGTAAACAAGAGTTTAGGCGTCTCTTTACTTATTATGTGACTCCAAGGAAGTTAGAAAGCAATAGTACTAGAGAGTGGTCAGAGGAAAGTAAAACAAATACAATACAACCAACACCAGGTCCTTCAAGCAACAACACATCTGAAAATGCCAATAAACCATGGTATCTCAAAGATGAAACCTTGTGGGCATTAGGTTTGGGCATTGGATTGCTTTTATCATCTCTCTTCTTTGTGGTAAAGGCACTCAAGTTATTAGAGACACAGGTAGGGAAAAGCCATCATGCATCACTCCATAAAAAGGCTACAACTGAGGTTCAAGAGGGGAAACTAAAAGGAGATTCAGAACTTGTATTCTTTGTTGAAGATCATGAAAGGTTCACAATGGAGGACCTACTTCGAGCCAAAGCTGACTTGCAACATGAAAGCTTTTGCAGCAACCTTTACAAGGTGAAACTAGAGAATAATGTCCATTATGCTGTCAAAAGATTAAAGAATTTGCAGGTTTCCTCTGAAGAATTTGGCAAAACATTAAGACAAATTAGTAACTTGAAGCATCCAAATATCCTCCCCCTTGTTGGTTACCGTTCTACCAGTGAAGAAAAATTGATCATTTACAAATATCAAAGCAATGGCAGTCTGCTCAATCTTTTACATGATTATATAGCAGGTAGAAAAGATTTTCCATGGAAACTGCGTCTCAATATAGCATGTGGGATTGCAAGGGGTTTGGCCTTCATATATAGGAAGTTGGATGGAGGAGAGGCCATTCCTCATGGAGATCTTAAGCCATCAAATATCCTTCTTAGTGACAAAAATGAACCACTAATAAGTGAGCATGGTTTATCAAAATTCTTGGACCCAAATAGAGGTTTCCTTTTTTCCTCTCAGGGATATACAGCTCCTGAAAAGAGTTTAACAGAAAAGGGTGATGTGTATAGCTTTGGAGTGATTCTGTTGGAACTACTAACAGGAAAAAGCATAGAAGTAAGTAGAATAGACCTTGCTAGATGGGTAAGGTCCATGGTGAGGGAGGAATGGACAGGTGAGGTCTTTGACAAAGAGGTTAGGGAAAATGAACATCAATGGGCATTTCCTTTGTTGAATATAGCCCTCATGTGTGTGTCACGTTTGCAAGAAAATAGGCCAACTACAACAGAGATTTTGGAGACAATAGAGGAGGTCATGGATGCACAAGAACATTATCATGATGAATGTTGTTCACTTCACAAAATCATACCTGATACATGGGATAGTCCAGGATCAAATTATTGA | 1701 | 0.3845 | MVCTGGELSESESFFNFLRAVDSNNVLNISWIGSTSHPCLVKLNGVRCNFNATNIVEIRLENLNLSGIIDADSLCRLQKLRVVSLAKNNIRGTIPHSILHCARLVHLNLTSNQLSGRLPKALTKLKYLESLDISNNNFSGMIPSKQEFRRLFTYYVTPRKLESNSTREWSEESKTNTIQPTPGPSSNNTSENANKPWYLKDETLWALGLGIGLLLSSLFFVVKALKLLETQVGKSHHASLHKKATTEVQEGKLKGDSELVFFVEDHERFTMEDLLRAKADLQHESFCSNLYKVKLENNVHYAVKRLKNLQVSSEEFGKTLRQISNLKHPNILPLVGYRSTSEEKLIIYKYQSNGSLLNLLHDYIAGRKDFPWKLRLNIACGIARGLAFIYRKLDGGEAIPHGDLKPSNILLSDKNEPLISEHGLSKFLDPNRGFLFSSQGYTAPEKSLTEKGDVYSFGVILLELLTGKSIEVSRIDLARWVRSMVREEWTGEVFDKEVRENEHQWAFPLLNIALMCVSRLQENRPTTTEILETIEEVMDAQEHYHDECCSLHKIIPDTWDSPGSNY* | 567 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g00271 | 566 | Pfam | Leucine rich repeat | 79 | 138 | IPR001611 | GO:0005515 | |
Rops9g00271 | 566 | SUPERFAMILY | Protein kinase-like (PK-like) | 289 | 534 | IPR011009 | - | |
Rops9g00271 | 566 | Gene3D | Transferase(Phosphotransferase) domain 1 | 352 | 555 | - | - | |
Rops9g00271 | 566 | SUPERFAMILY | L domain-like | 17 | 145 | - | - | |
Rops9g00271 | 566 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 399 | 411 | IPR008271 | GO:0004672|GO:0006468 | |
Rops9g00271 | 566 | MobiDBLite | consensus disorder prediction | 165 | 193 | - | - | |
Rops9g00271 | 566 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 71 | 163 | - | - | |
Rops9g00271 | 566 | ProSiteProfiles | Protein kinase domain profile. | 246 | 538 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g00271 | 566 | Gene3D | Phosphorylase Kinase; domain 1 | 240 | 350 | - | - | |
Rops9g00271 | 566 | Gene3D | Ribonuclease Inhibitor | 9 | 173 | IPR032675 | - | |
Rops9g00271 | 566 | PANTHER | OS05G0588300 PROTEIN | 9 | 539 | - | - | |
Rops9g00271 | 566 | Pfam | Protein kinase domain | 291 | 532 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g00271 | 566 | SMART | serkin_6 | 275 | 538 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g00271 | 566 | MobiDBLite | consensus disorder prediction | 170 | 193 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g00271 | Rops-Chr9 | 3382741 | 3384810 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g00271 | 8 | 537 | Receptor kinase-like Gene Family | AT4G23740 | 31.803 | 5.53e-71 | 238 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Rops9g00271 | Pkinase | 1.3e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g00271 | - | - | gmx:100807491 | 840.106 |