Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00270 ATGAATAGTAGTGATATTCAGTGCCTTCTTCCTTTGCTGACTGTTGTTGTGTGTGATTTGGTTGCAAAGGGTAGGAGCTTCGTCTGCTTCTCTTTTCTGCCGAAAGTTGCAGACTTTAGTTTCCTATACTTCTGGGTCAAGCAATCGGTTTTCTTCATGATGCCGAGTGTCAACCCTGGCCCATCTGACAAAGATTCTGAGCCATTTGTTGAAACCGATCCAACTGGTCGCTATGGTCGATACAGTGAGTTACTTGGATGTGGAGCTGTGAAAAAAGTGTACCGTGCATTTGATCAAGAAGAAGGAATAGAGGTTGCTTGGAACCAAGTGAAGCTTAGGAACTTCTCTGATGACCCTGCAATGGTGGATAGGCTTTACTCTGAAGTGAGGTTACTCAGAAGTTTGACCAACAAAAACATCATTGCCCTTTACAGTGTTTGGAGGGATGAGCAACGTGACACACTCAATTTCATCACTGAGGTTTGTACCAGTGGGAATTTGAGGGAGTATAGGAAAAGGCACAGGCATGTTTCTATTAAGGCCCTGAAGAAGTGGTCTAAGCAGATTTTGAAAGGGTTGAATTATCTGCATACGCATGATCCATGCATCATTCATAGAGATCTCAATTGCAGTAATGTGTTTGTCAATGGGAATATTGGCCAGGTCAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGTAAGAACCATTGTGCACACTCAATTCTTGGTACACCAGAATTTATGGCTCCAGAGTTATATGATGAAGACTACACAGAATTGGTGGACATATACTCATATGGGATGTGTGTGTTAGAGATGGTGACACTGGAAATTCCTTATAGTGAGTGTGACAATGTTGCAAAGATTTACAGAAAGGTTTCTTCAGGGGTAAGACCTGCAGCCTTGAACAAGGTTAAGGATCCAGAAGTTAAGGCCTTCATTGAGAAGTGCCTTGCTCAGCCAAGGGCAAGACCTTCTGCTGCTGAGCTTCTCAAAGATCCTTTCTTTGATGAGATTGTTGATGATGACGAAAATGATGATTGTGTTAGTTCATACTAA 1062 0.4256 MNSSDIQCLLPLLTVVVCDLVAKGRSFVCFSFLPKVADFSFLYFWVKQSVFFMMPSVNPGPSDKDSEPFVETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVDRLYSEVRLLRSLTNKNIIALYSVWRDEQRDTLNFITEVCTSGNLREYRKRHRHVSIKALKKWSKQILKGLNYLHTHDPCIIHRDLNCSNVFVNGNIGQVKIGDLGLAAIVGKNHCAHSILGTPEFMAPELYDEDYTELVDIYSYGMCVLEMVTLEIPYSECDNVAKIYRKVSSGVRPAALNKVKDPEVKAFIEKCLAQPRARPSAAELLKDPFFDEIVDDDENDDCVSSY* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00270 353 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 63 340 - -
Rops9g00270 353 Pfam Protein kinase domain 82 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00270 353 CDD STKc_WNK 77 337 - -
Rops9g00270 353 FunFam Probable serine/threonine-protein kinase WNK1 63 160 - -
Rops9g00270 353 ProSiteProfiles Protein kinase domain profile. 79 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g00270 353 Gene3D Transferase(Phosphotransferase) domain 1 162 343 - -
Rops9g00270 353 SUPERFAMILY Protein kinase-like (PK-like) 74 338 IPR011009 -
Rops9g00270 353 FunFam probable serine/threonine-protein kinase WNK9 162 343 - -
Rops9g00270 353 Gene3D Phosphorylase Kinase; domain 1 63 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00270 Rops-Chr9 3368915 3379786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00270 58 341 MAP Kinase Kinase Kinase AT5G55560 84.155 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops9g00270 Pkinase 6.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00270 K08867 - gmx:100786910 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00270 9 3368915 3379786 Rops9g00270 9 3368915 3379786 ECH
Rops11g02659 11 45440069 45441392 Rops9g00270 9 3368915 3379786 PCT