Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00268 ATGGACGCCGCTACCACCAACTCCGGCGAACCCCACTTGAATTCGGAGCTCCGGGTCAAAGGGGTATCCTATGATGACCCGAATCGTAACGGGTCGGGTCAGAATTCGACCGCAAGGTACAAGCTTTTGTCGCCGGCGAAACTTCCGATCTCGAGGTCACCGTGCATCACGATACCTCCGGGACTGAGTCCGACGTCGTTTTTGGAGTCACCGGTTCTTCTTTCCAACATGAAGGTGGAGCCTTCACCGACTACAGGGTCCCTTCCTAAGCTTCACCAAACAGTTCATGGTTCTATGGCTTCTGCTGCATCTGCTACATTTCCTGGAACTACTGCATGCTTCAATACCAATACTGTTGATGACAGAAAGTCAAGCTTCTTTGAGTTTAGACCACACAATAGATCGAATATGGCTCCTGCAGACTTCAACAACCATGTAAGTGAACAATCTACTCAAGTAGAAGGTTCAGGAAAAGCTCAACCATTTGCCTCCTCACCATTAATAGAAAGTGAGATAGCAGTTCCATCTAATGAATTAAGCCTATCATCACCTGTTCAAATGGTTAGTTCTGGGGCTAGTCCTCCTGTTGATGTTGAAGTGGATGAATTTAACCACAAAGGCAACACAACTACTGGGCTTCAAACATCACATGTTGAGGTTAGAGGCAGTGGACTTTCGGTTGCAGCTGAGAAAGCATCTAGTGATGGATACAATTGGCGAAAATATGGGCAGAAACTTGTTAAAGGAAGTGAATTTCCACGCAGCTATTACAAATGTACACATCCTAACTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATTTACAAGGGAACTCATGATCATCCTAAACCTCAACCAAGCAACCGATTCTCTGCTGGTACTATTATGTCCTTGCAAGGAGAGAGATTGGATAAGGCTGCTTCTTTTGCTGGCCGAGATGACAAAGCATCCAATGTGTATGGTCAGGTGTCTCATGCAGCAGAGCCCAACAGTACTCCAGAGCTATCACCTGGAGCAACAAATGATGATAGTCTAGAGGGTGCTGGATTTGTGTCAAACAGGACAAATGATGAGGTTGATGATGACGATCCCTTCTCAAAGCGAAGAAAAATGGAACTTGGAAATGCTGACATCATTCCTGTAGTTAAGCCTATCCGGGAGCCAAGGGTTGTTGTACAAACTCTGAGTGAAGTTGATATTTTGGATGATGGGTACCGCTGGCGTAAATATGGGCAGAAGGTGGTGAGAGGAAATCCTAACCCAAGGAGTTATTACAAATGCACAAATGCTGGTTGCCCCGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCGAAAGCAGTAATAACCACATATGAGGGTAAACACAATCATGATGTACCTGCTGCAAGGAATAGCAGCCATGACATGGCAGGACCATCAGCTGCAGTTGGACAAACAAGAATCAAGTTAGAAGAAAGTGATACTATTAGCCTTGACCTTGGCATGGGAATGAGTTCAGCTGCTGAAAATAGATCAAATGGGCAAGGGAAAATGTTACTCTCTGAATTTGGGGACAGTCAAACTCACACTAGCAATTCCAATTTCAAGTTTGTTCATACTACCCCAGCTCCAGTATGCTATGGTGTTCTAAATAACAGCTCAAATCCGTTTGGTTCTAGAGAAAATAGGAGTGATGGTTCAACTTTAAACCATTCCTCATATCCTTGCTCACAGAACATGGGAAGAATACTAATGGGTCCATGA 1770 0.4446 MDAATTNSGEPHLNSELRVKGVSYDDPNRNGSGQNSTARYKLLSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPKLHQTVHGSMASAASATFPGTTACFNTNTVDDRKSSFFEFRPHNRSNMAPADFNNHVSEQSTQVEGSGKAQPFASSPLIESEIAVPSNELSLSSPVQMVSSGASPPVDVEVDEFNHKGNTTTGLQTSHVEVRGSGLSVAAEKASSDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSNRFSAGTIMSLQGERLDKAASFAGRDDKASNVYGQVSHAAEPNSTPELSPGATNDDSLEGAGFVSNRTNDEVDDDDPFSKRRKMELGNADIIPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAGPSAAVGQTRIKLEESDTISLDLGMGMSSAAENRSNGQGKMLLSEFGDSQTHTSNSNFKFVHTTPAPVCYGVLNNSSNPFGSRENRSDGSTLNHSSYPCSQNMGRILMGP* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00268 589 SUPERFAMILY WRKY DNA-binding domain 231 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 MobiDBLite consensus disorder prediction 333 375 - -
Rops9g00268 589 FunFam WRKY transcription factor 33 396 462 - -
Rops9g00268 589 SUPERFAMILY WRKY DNA-binding domain 401 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 ProSiteProfiles WRKY domain profile. 228 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 SMART WRKY_cls 409 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 Pfam WRKY DNA -binding domain 235 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 Pfam WRKY DNA -binding domain 410 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 ProSiteProfiles WRKY domain profile. 404 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 Gene3D WRKY domain 394 470 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 Gene3D WRKY domain 225 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g00268 589 MobiDBLite consensus disorder prediction 1 39 - -
Rops9g00268 589 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 69 506 IPR044810 GO:0003700
Rops9g00268 589 MobiDBLite consensus disorder prediction 333 347 - -
Rops9g00268 589 MobiDBLite consensus disorder prediction 559 581 - -
Rops9g00268 589 MobiDBLite consensus disorder prediction 559 589 - -
Rops9g00268 589 FunFam WRKY transcription factor 223 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00268 Rops-Chr9 3352951 3357752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00268 43 589 WRKY Transcription Factor Family AT4G26640 56.989 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops9g00268 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00268 - - gmx:100816583 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00268 9 3352951 3357752 Rops9g00268 9 3352951 3357752 ECH
Rops11g02650 11 45363728 45370156 Rops9g00268 9 3352951 3357752 PCT