Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00257 ATGTCGTTTGTTTTCTCATCCATTTCAATCATGCATCCTACCACTGGTTTTCTCCTCAAACCCATTTTCCTTCATGGCTTATCTGGCTTCATCCATCTATTGTTGGTGGTGGCGGTTTTAGTGTCTTGGGTTTGGAAGAAAATCACAAGGGGTGCTAGGGATGAACCTAAGGAGAAATCCAATAACACCCTGTTTAAAATGACTATGTTTTGTTCTCTTGGTGTTTCTGCATTCAGTCTTGTTCTCTTCCTGTTTAATTACTTCTATTGGTATAGAAGTGGTTGGTCAGAAGAAAAGCTCGTGACCCTTTTGGATTTAGCGCTCAAAACAGTGGCTTGGGGTGTTGTTTATGTTTGCTTGCATAAGGGGTTCTTCAGTTCAGGTGAAAGAAGATTTCCATTGTTCTTCAAAGCTTGGTGCGCTTTCTACCTGTTTATTTCCTCTTATTGCTTCGTAGTGGACATTTTTGTTCTGTGTGAAAACCATGTGGCCTTACCAGCTCAGAGCATAGTTTCTGATGTGGTATCTGCTTGTGTCGGTTTATTATTCTGTTACGTTGGGTATTTTATGAAAAACGAGGGTGAAGATAACAGTCTTCAAGAACCCCTTTTGAACGGTGATACACAAGTTGGTAACTCCTTGGGAACAAAAGAGAAAAAGGGGGGTGACACTGTTACCCCTTTCTCAAATGCTGGAATTTTCAGCATTCTTACCTTCTCTTGGATGGGTCCTCTTATAGCTGTTGGCAACAAGAAGACATTAGACCTTGAGGATGTCCCTCAACTGGACAGCAGAGACAGTGTAGTTAGAGCTTTTCCAACTTTCAGAGATAAACTTGAGGCTGATTGTGGTACAATTAACAGTGTGACCACACTTAAGCTTGTGAAGTCATTGTTAATCTCAGCGTGGAAAGAGATTCTTTTCACAGCTTTTCTTGCATTGTTAAAAACGTTGGCTTCTTATGTTGGTCCTTACCTCATTGATACTTTTGTTCAATACCTTGATGGACAACGACAATATGAAAATCAGGGTTATGTTTTGGTTTCTGTATTTTTCTTTGCAAAGCTTGTAGAGTCCCTGTCGCAAAGACATTGGTTCTTTAGGTTGCAACAAATTGGAATTCGAATCCGAGCACTGCTTGTGACAATGATATATAATAAAGCCTTGACCATTTCATGTCAATCAAGGCAGGGCCACACTTCTGGGGAAATAATCAATTTCATGTCCGTTGATGCTGAAAGAGTTGGTGTATTCAGTTGGTACTTGCATGATTTGTGGATGGTAGCCTTGCAAGTTTCGTTAGCCTTGTTGATTTTGTATAAAAACCTTGGGCTTGCTTCAATTGCTGCTCTTGTTGCAACTTTCCTTGTCATGTTGGCAAATGTTCCCTTGGGGTCATTGCAAGAGAAGTTTCAGGAAAAGTTGATGGGGTCTAAAGATACAAGAATGAAGACCACGTCTGAGATTTTAAGCAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAAATAACTGAGCTCAGGAATGCGGAGCAAGGCTGGTTAAAAAAATTTCTTTATACTTCAGCTATGACTACATTTGTATTTTGGGGTGCCCCCACATTTGTATCCGTGGTTACTTTTGGTACTTGTATGCTTTTAGGAATCCCACTTGAATCAGGGAAGATCTTGTCTGCACTTGCAACATTCCGGATTCTTCAGGGGCCCATTTATAATCTTCCAGATACAATTTCAATGATAGCACAAACTAAAGTGTCTGTTGACAGGATTGCGTCATTCCTTTGTCTAGATGACTTGCAGTCTGATGTAGTAGAAAAGCTTCCTCGGGGTAGTTCTGTCACAGCAATTGAAGTAGTTGATGGAAATTTTTCTTGGGATTTATCTTCCCCTAATCCAACGTTGCAAAACATAAATCTCAGAGTCTCTCATGGCATGAGGGTTGCTGTTTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAAGTACCAAAGATATCAGGTATCCTTAAGGTTTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATACAAAGCGGCAAGATAGAGGATAATATATTGTTTGGTAGCGACATGGATAGGGAAAGGTATGACAAGGTACTTGAAGCCTGTTCCCTGAAGAAGGATCTTGAGATTTTGTCATTTGGTGATCAGACAATTATAGGAGAGCGTGGAATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCACGTGCTCTTTACCAAGAGGCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGGTCTCACCTTTTTAAGGAATGCTTGCTGGGCCTTTTAAGTTCAAAAACAGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATATTGGTGATGAAAGATGGGAAAATTACTCAATGTGGAAAGTTTAATGATCTGCTTAACAGTGGGGCTGATTTTATGGAACTTGTTGGTGCACACAGAAAAGCTTTGTCTACACTTGATTCATTGGATGGAGGGACAGTATCTAATGAAATAAGTACCTTGGAACAAGATGTAAATGTCTCTAGCACTCATGGTATTAAAGAAAAAGAGGCAAACAAAGATGAGCAAAATGGTAAAGCAGACAACAAAGGTGAACCAAAAGGCCAGCTTGTTCAAGAAGAGGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTCTATTGGAAATATATCACCACTGCATATGGAGGAGCTCTTGCACCATTCGTATTATTGGCTCACATTCTCTTTCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGCATGGGCAACTCCTATCTCAGCAGATGTGGAGCCACCTGTTGGAGGAACGACTCTTATAGAAGTCTATGTTGGTTTGGCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAGCAATGTTGCTTGTCACAGCTGGTTATAAGACAGCTACTCTCCTCTTCAATAAAATGCACTTCTGTGTTTTTCGAGCCCCCATGTCGTTTTTTGATTCGACTCCAAGTGGGCGAATCCTTAACAGAGCTTCTACTGATCAAAGTGCAGTGGATACAGACATTCCTTATCAAATTGGGAATGTTGCCTTCACAATGATCCAACTTCTGGGAATTATTGCAGTGATGTCTCAGGTTGCATGGCAGGTTTTCATTGTCTTTATACCTGTGATAGCAGTCAGCATTTGGTATCAGCAATATTATTTACCACCAGCCCGAGAACTATCACGTTTAGTAGGAGTATGCAAAGCCCCAATCATTCAACACTTTGCTGAAACAATTTCTGGTACTTCAACCATTAGAAGCTTTGATCAGCAGTCAAGATTTCAGGATGCAAATATGAAACTGACTGATGGGTATTCTCGGCCAAAATTCAATATTGCTGGTGGTATGGAATGGTTATGCTTCCGCTTAGATATGTTGTCATCTATCACATTTGCCTTTTCCTTGATATTCTTGATATCTATTCCACAGGGAATCATAGATCCAGGTATTGCTGGTTTAGCCGTTACCTACGGACTTAATTTGAATATGATACAAGCTTGGGTGATATGGAGTCTTTGCAACTTGGAGAATAAAATTATATCAGTAGAGAGAATACTTCAGTATACTTGCATTCCTAGTGAGCCTCCCCTTGTTGTGGAAGAAAATCAGCCAGATCCTTCTTGGCCTTCATATGGCGAGGTTGATATACAGGACTTACAGGTTCGTTATGCTCCTCATCTTCCTCTGGTGTTGCGTGGCCTTACATGCACATTTCGTGGAGGACTTAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCAACTCTCATACAAACACTTTTCCGAATTGTTGAGCCTACTGCTGGGCAAGTTATGATTGACAGCATCAACATCTCTTCAATCGGACTTCATGATTTGAGGTCTAGACTAAGCATTATCCCTCAGGATCCAACCATGTTTGAGGGGACAGTGAGAAATAATCTGGACCCCCTGGAAGAGTACGCGGATGAACAGATTTGGGAGGCCTTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTAGACTCTGCAGTTAGCAAGAATGGTGAGAATTGGAGCATGGGTCAAAGGCAGTTGGTGTGCCTTGGTAGGGTGCTGCTCAAGAAAAGCAAGGTTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCTACGGATAATTTGATTCAGCAAACTCTTAGGCAGCATTTCTGTGACTCAACAGTCATTACCATTGCACATCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGACTCCCCATCAGCATTGCTAGAGGACAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATACCATGAGGGATTGTGTTACTTATGGGGGATAG 4494 0.4097 MSFVFSSISIMHPTTGFLLKPIFLHGLSGFIHLLLVVAVLVSWVWKKITRGARDEPKEKSNNTLFKMTMFCSLGVSAFSLVLFLFNYFYWYRSGWSEEKLVTLLDLALKTVAWGVVYVCLHKGFFSSGERRFPLFFKAWCAFYLFISSYCFVVDIFVLCENHVALPAQSIVSDVVSACVGLLFCYVGYFMKNEGEDNSLQEPLLNGDTQVGNSLGTKEKKGGDTVTPFSNAGIFSILTFSWMGPLIAVGNKKTLDLEDVPQLDSRDSVVRAFPTFRDKLEADCGTINSVTTLKLVKSLLISAWKEILFTAFLALLKTLASYVGPYLIDTFVQYLDGQRQYENQGYVLVSVFFFAKLVESLSQRHWFFRLQQIGIRIRALLVTMIYNKALTISCQSRQGHTSGEIINFMSVDAERVGVFSWYLHDLWMVALQVSLALLILYKNLGLASIAALVATFLVMLANVPLGSLQEKFQEKLMGSKDTRMKTTSEILSNMRILKLQGWEMKFLSKITELRNAEQGWLKKFLYTSAMTTFVFWGAPTFVSVVTFGTCMLLGIPLESGKILSALATFRILQGPIYNLPDTISMIAQTKVSVDRIASFLCLDDLQSDVVEKLPRGSSVTAIEVVDGNFSWDLSSPNPTLQNINLRVSHGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSPWIQSGKIEDNILFGSDMDRERYDKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQIARALYQEADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKFNDLLNSGADFMELVGAHRKALSTLDSLDGGTVSNEISTLEQDVNVSSTHGIKEKEANKDEQNGKADNKGEPKGQLVQEEEREKGKVGFSVYWKYITTAYGGALAPFVLLAHILFQVLQIGSNYWMAWATPISADVEPPVGGTTLIEVYVGLAIGSSFCILARAMLLVTAGYKTATLLFNKMHFCVFRAPMSFFDSTPSGRILNRASTDQSAVDTDIPYQIGNVAFTMIQLLGIIAVMSQVAWQVFIVFIPVIAVSIWYQQYYLPPARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSRFQDANMKLTDGYSRPKFNIAGGMEWLCFRLDMLSSITFAFSLIFLISIPQGIIDPGIAGLAVTYGLNLNMIQAWVIWSLCNLENKIISVERILQYTCIPSEPPLVVEENQPDPSWPSYGEVDIQDLQVRYAPHLPLVLRGLTCTFRGGLKTGIVGRTGSGKSTLIQTLFRIVEPTAGQVMIDSINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYADEQIWEALDKCQLGDEVRKKEGKLDSAVSKNGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFCDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDSPSALLEDKSSSFAQLVAEYTMRDCVTYGG* 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00257 1497 CDD ABC_6TM_ABCC_D2 934 1226 IPR044726 GO:0140359
Rops9g00257 1497 CDD ABCC_MRP_domain2 1249 1469 - -
Rops9g00257 1497 Pfam ABC transporter 1269 1416 IPR003439 GO:0005524
Rops9g00257 1497 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1251 1485 IPR003439 GO:0005524
Rops9g00257 1497 MobiDBLite consensus disorder prediction 874 908 - -
Rops9g00257 1497 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Rops9g00257 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 843 IPR027417 -
Rops9g00257 1497 Gene3D - 604 854 IPR027417 -
Rops9g00257 1497 SUPERFAMILY ABC transporter transmembrane region 297 599 IPR036640 GO:0005524|GO:0016020
Rops9g00257 1497 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 621 844 IPR003439 GO:0005524
Rops9g00257 1497 FunFam ABC transporter C family member 10 290 603 - -
Rops9g00257 1497 CDD ABCC_MRP_domain1 621 821 - -
Rops9g00257 1497 ProSitePatterns ABC transporters family signature. 746 760 IPR017871 GO:0005524|GO:0016887
Rops9g00257 1497 Gene3D - 1234 1487 IPR027417 -
Rops9g00257 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1242 1481 IPR027417 -
Rops9g00257 1497 FunFam ABC transporter C family member 5 895 1232 - -
Rops9g00257 1497 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops9g00257 1497 Gene3D ABC transporter type 1, transmembrane domain 286 603 IPR036640 GO:0005524|GO:0016020
Rops9g00257 1497 Gene3D ABC transporter type 1, transmembrane domain 894 1232 IPR036640 GO:0005524|GO:0016020
Rops9g00257 1497 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 228 1485 - -
Rops9g00257 1497 SUPERFAMILY ABC transporter transmembrane region 934 1233 IPR036640 GO:0005524|GO:0016020
Rops9g00257 1497 SMART AAA_5 1277 1469 IPR003593 GO:0016887
Rops9g00257 1497 SMART AAA_5 648 821 IPR003593 GO:0016887
Rops9g00257 1497 FunFam ABC transporter C family member 3 1234 1486 - -
Rops9g00257 1497 Pfam ABC transporter transmembrane region 939 1177 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops9g00257 1497 Pfam ABC transporter transmembrane region 307 574 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops9g00257 1497 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 934 1214 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops9g00257 1497 MobiDBLite consensus disorder prediction 875 908 - -
Rops9g00257 1497 FunFam ABC transporter C family member 5 606 853 - -
Rops9g00257 1497 Pfam ABC transporter 639 773 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00257 Rops-Chr9 3197685 3203654 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00257 617 851 Calmodulin-binding Proteins AT2G36910 30.078 7.95e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00257 - K05666 gmx:100777836 2549.62