LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops9g00253	ATGTGTTGTGTAGCAAGGAATATGGACATAATAGAGGAATTAAACAATGTTGACGAATCTGATGTTCATGATGATGCTGGTAATAATGGCGAGACTTTCAATGGTGATTATACAACTCCAGACCCAGCAGAAGGGATGTCATTTGCTTCTGAAGAAGATGTGAAATCACTTTATGTGTCATATGCTAGTAGGAAGGGTTTTAGATGGAAGATAAGGACATCTAAAAAGACAGATGATGGGAAAGTAAATTACATAATTCTAGCATGCTCAAGAGAGGTAAATCGTAAGTCATCCATATCAACTACTTTGAAGACACTTCCAACAAGAGTAAAAAATTGTAAGGCAAAGCTTACTGCTAGGTTGGAAGAAGATGAACAATGGTATATAAGAACGGTTATAGATGAGCACAGTCACAATCTAAGTCCAAAAAAGGCAAGATTGTTCCCAGTGAACAAGAACATGGATATGCATGTGAAGACAACAATTCAGATCAATGATGATGCAGGGGTGATGATTAACAAGACATTTCGGTCTCTTGTTGTAGATGTAGGAGGGTATGACAATTTATCATTTGTTGAAAAAGATGTCAGGAATTATGTCCTTAAAGAAAGACGTGCAATTGGGAAGGAGGGTGATGGTAAAACGTTAATAAGTTATTTTCACAGGATGCAAATACAAAATAACAATTTCTTCTATGATATTGATTTGGATGATGATTTTCGTGTGAAGAATGTATTTTGGGCAAATGCTAAGAGTAGAGCCACATATTAA	771	0.358	MCCVARNMDIIEELNNVDESDVHDDAGNNGETFNGDYTTPDPAEGMSFASEEDVKSLYVSYASRKGFRWKIRTSKKTDDGKVNYIILACSREVNRKSSISTTLKTLPTRVKNCKAKLTARLEEDEQWYIRTVIDEHSHNLSPKKARLFPVNKNMDMHVKTTIQINDDAGVMINKTFRSLVVDVGGYDNLSFVEKDVRNYVLKERRAIGKEGDGKTLISYFHRMQIQNNNFFYDIDLDDDFRVKNVFWANAKSRATY*	257

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops9g00253	256	MobiDBLite	consensus disorder prediction	18	46	-	-
	Rops9g00253	256	PANTHER	OS01G0519700 PROTEIN	35	256	-	-
	Rops9g00253	256	Pfam	FAR1 DNA-binding domain	57	141	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops9g00253	Rops-Chr9	3149683	3150453	Dispersed/Proximal

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Rops9g00253		FAR1	1e-11	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops9g00253	-		-	psat:127087122	296.589