Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00241 ATGGAGCATCACGACCCTTTCTCTATTTCCCTCATTGCCTCCATTCTCTTTCTATTCGTGCTCCTCAAATTAGTTAAAAGATCTAGTTCTAACAACTCCACTACCAAATTACCCCCAGGACCAAGAACACTACCTATCATAGGAAACACACATCAGATTCTTAGCTCCATGCCCCATCACTGCTTCAGAAATTTGGCAGATAAATATGGACCCTTAATGCACCTAAAACTAGGAGAGGTATCCAACATCATAGTTACTTCACCAGAGATAGCCAAAGAGATTATGAAAACACAAGACCTCAACTTTTGTGATAGGCCCAACCTTCTTTTATCCACAGTACTTTCTTACAATGCTACAGATATTGGTTTCTGTCCATATGGAGAATACTGGAGGCAACTACGAAAGATATGCACCGTAGAGCTATTAAGTGCAAAGCGTGTACAATCATTTCGGTCCATAAGAGAGGAAGAGGTGTCACAACTAGTTAAAACAATATCTGCAAGTGAAGGATCCTTTGTTAATCTCAGTGAGAAGATTTTCTCAATGATATATGGGATAACAGCAAGGGCAGCTTTTGGGAAAATAAACAGAAACCACAAAGTGTTCAAGTCAACGATTGAGGAAGCATTGAATCTGGCAGGAGGATTTTGTGTTGCTGATCTCTATCCTTCTATCAAAGTGCTTCAGAGGATGAGTTGGGCTAAGGTCAAACTCGAAAAATTGCAGAGAGAAACTGATAGGATATTGCAAGACATCATCGATGATCACAAAAGTAAGAAGAATAGCCAACAGAAAGAAAGGGAAGGGGAAGATCTAGTTGATATTCTTCTCAAGCTTCAACTGGATAAGGAGTATCCCTTGACCAATGACAATATTAAAGCAGTCATCCAGGACATGTTCACGGCTGGTGGAGAAACAACATCAGGGATTGTGTTATGGGGGATGGCAGAAATGGTAAAGAACCCAAAGATAATGGAAGAAGCACAAATTGAGGTAAGAAGGGTATTTGATACCAAAGGATACGTGGATGAGACAGAGTTACACCAATTAATATACTTAAAGTCCATTATCAAAGAAACCCTGAGGCTACATCCATCTGTGCCATTGTTAGTTCCAAGACAAAGTAGGGAGAGATGCCAAATCAATGGATATGAAATACCAGCCAAGAGCAGGATCATTGTTAATGCTTGGGCAATGGCAAGGGATCCCAAGTATTGGGCTGAAGCTGAGAGTTTTAAACCTGAGAGATTTCTTAATAGCCCAATTGATTTCAGAGGCAGAGACTTTGAATATATTCCATTTGGTGCTGGAAGAAGGATGTGCCCAGGTATTGCATTTGCCTTACCCAGCATTGAATTGCCACTTGCTCAATTACTTTACCATTTTGATTGGAAGCCTCCCAATGGAATGAAGAATGAAGAACTTGACATGACTGAGTCATTTGGGTTTACTATAAGAAGAGCAAATGACCTCTGCTTGATTCCCATTATTCGTCGCTCTTAA 1503 0.4032 MEHHDPFSISLIASILFLFVLLKLVKRSSSNNSTTKLPPGPRTLPIIGNTHQILSSMPHHCFRNLADKYGPLMHLKLGEVSNIIVTSPEIAKEIMKTQDLNFCDRPNLLLSTVLSYNATDIGFCPYGEYWRQLRKICTVELLSAKRVQSFRSIREEEVSQLVKTISASEGSFVNLSEKIFSMIYGITARAAFGKINRNHKVFKSTIEEALNLAGGFCVADLYPSIKVLQRMSWAKVKLEKLQRETDRILQDIIDDHKSKKNSQQKEREGEDLVDILLKLQLDKEYPLTNDNIKAVIQDMFTAGGETTSGIVLWGMAEMVKNPKIMEEAQIEVRRVFDTKGYVDETELHQLIYLKSIIKETLRLHPSVPLLVPRQSRERCQINGYEIPAKSRIIVNAWAMARDPKYWAEAESFKPERFLNSPIDFRGRDFEYIPFGAGRRMCPGIAFALPSIELPLAQLLYHFDWKPPNGMKNEELDMTESFGFTIRRANDLCLIPIIRRS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00241 500 PANTHER OS08G0105600 PROTEIN 60 497 - -
Rops9g00241 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 CDD CYP71-like 68 491 - -
Rops9g00241 500 Gene3D Cytochrome P450 30 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 FunFam Cytochrome P450 71D8 30 495 - -
Rops9g00241 500 Pfam Cytochrome P450 38 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00241 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00241 Rops-Chr9 2927610 2929557 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00241 16 499 Cytochrome P450 AT1G13110 40.562 2.72e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00241 - - gmx:606548 694.886