Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00239 ATGGAGCATCATCACTATTCGTTCTTACCCTTCCTCTTATTTTCACTGATTTTCATCCTCTTCCTCTCACAGATCCTGAAAGTGAGAAAAAGATTCACTAAGGTCTCAGACAAAACACAGAACCTTCCCCCTGGGCCATGGAAGCTTCCTATCATTGGAAGCATACACCACCTTATTGGCAATCTACCCCATCACCGCTTGAGAGAACTAGCACAAAAATATGGCCCTTTGATGCACCTAAAACTTGGTGAAGTATCAACCATCGTGGTTTCATCTCCTGAAGTTGCCAAAGAGGTGTTGAAAACCTATGATGCCATCTTTGCTCAAAGGCCTCACCAAGTTGGTGCAGATATCATGTGTTATGGTTCCACTGACATTGCCACTGCCCCATATGGAGGCTATTGGAAGCAACTAAGAAGACTATGCTCCCTAGAGCTTCTTTGCTCTAAACGTGTGAGATCATTCCAATCGATCAGGGAAGAAGAAGTATCCAATTTGATAAGATATATTTCTACTCATACTGGATCTTCTATCAACCTTAGTGAAAAAGTTGTTTGCATGACAAGCGCCATTACTGCAAGGGCAGCTTTTGGTAAAAGATGTAAGGATCAAGAAGAATTCATTTCCTTGATCAGGAAACTTGTGAAACTGGCTGAAGGTTTTGTTGTTTTTGATTTGTTTCCTTCTCAAAAGTGGCTTCATCTGATCAGTGGAGCCAAGCCTAAACTCGAGAGATTGCATCGGAAATTTGATATAATTATTGAAAACATCATTAGTGAGGCAATAACAAAGACAGGTGAGGTAGAAGTAGAGGGTCTTCTCTCTGTTCTTCTAAACATTAAAGATCATGAAGCCCTTGAGTATCCCTTGACAATCGACAACATCAAAGCTGTGATTTTGGACATGTTTTTTGCTGGAAGTGATACATCATCTGCAGTTATAGAATGGGCATTTTCAGAAATGCTGCAAAACCCAAGAGTGATGATCAGAGCTCAAGAAGAAGTTAGAAAAGTTTTTGGTAGCAAAGGGTTCACCAACGAAACAGCTCTTCAAGAACTAAAATATCTGAAAGCAGTAATCAAAGAAACACTGAGATTACACCCTCCTTTTCCTCTTCTTCTCCCAAGAGAATGTAGAGAAACATGTGAGATAAAAGGGTACACAATACCTGCTGGAAACAAAGTGATAGTGAATGCATGGGCAATTGGAAGAGACCCTGAGTACTGGAGTGAACCAGAGAAGTTTTGTCCAGAGAGATTCCTGGATTGTCCAATTGATTACAAAGGTTTCCATGTTGAATACATACCTTTCGGTGCTGGAAGGAGAATATGTCCAGGCATTTTGTTTGGTACATCTAGCATTGAACTCTCTCTTGCACAGCTACTTTACTATTATAATTGGCAACTTCCCAATGAAGAATTAGAAATGACTGAAGCTCTGGGCTCCTCATCAAGAAGGAAAACAAATCTGATCTTAGTTCCCATTTCTTATAATCTTGTGCCTGTTTCATAA 1512 0.4015 MEHHHYSFLPFLLFSLIFILFLSQILKVRKRFTKVSDKTQNLPPGPWKLPIIGSIHHLIGNLPHHRLRELAQKYGPLMHLKLGEVSTIVVSSPEVAKEVLKTYDAIFAQRPHQVGADIMCYGSTDIATAPYGGYWKQLRRLCSLELLCSKRVRSFQSIREEEVSNLIRYISTHTGSSINLSEKVVCMTSAITARAAFGKRCKDQEEFISLIRKLVKLAEGFVVFDLFPSQKWLHLISGAKPKLERLHRKFDIIIENIISEAITKTGEVEVEGLLSVLLNIKDHEALEYPLTIDNIKAVILDMFFAGSDTSSAVIEWAFSEMLQNPRVMIRAQEEVRKVFGSKGFTNETALQELKYLKAVIKETLRLHPPFPLLLPRECRETCEIKGYTIPAGNKVIVNAWAIGRDPEYWSEPEKFCPERFLDCPIDYKGFHVEYIPFGAGRRICPGILFGTSSIELSLAQLLYYYNWQLPNEELEMTEALGSSSRRKTNLILVPISYNLVPVS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00239 503 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PANTHER OS08G0105600 PROTEIN 65 497 - -
Rops9g00239 503 CDD CYP71-like 73 490 - -
Rops9g00239 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Rops9g00239 503 SUPERFAMILY Cytochrome P450 43 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 Gene3D Cytochrome P450 35 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 FunFam Cytochrome P450 99A2 32 495 - -
Rops9g00239 503 Pfam Cytochrome P450 43 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00239 503 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00239 Rops-Chr9 2856405 2858634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00239 38 484 Cytochrome P450 AT3G48310 40.625 6.49e-126 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00239 - K23807 gmx:100779851 747.273