Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00238 ATGCTTGGGCAATTGGAAGAGATCCTAACTAAGTATTGGGCTGAAGCTGAGAGTTTTAAACCTGAGAGATTTCTTAATAGCTCAATTGATTTTAGAGGTACAGACTTTGATTATATCCCATTTGGTGCTGGAAGGAGGATGTGCCCAGGTATTGCATTTGCCTTACCCACCATTGAGTTGTCACTTGCTCAGTTACATTACCAGCCTCCCAATGGAATGAAGAATGAAGAACTTGACATGAGTGAGTCATTTGGGTTTATTATACAACAACAACAACCAAGTTTTATCCCACTAGGTCGGGTTGACTACATGTATCAAACGACGTCATAG 330 0.4061 MLGQLEEILTKYWAEAESFKPERFLNSSIDFRGTDFDYIPFGAGRRMCPGIAFALPTIELSLAQLHYQPPNGMKNEELDMSESFGFIIQQQQPSFIPLGRVDYMYQTTS* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00238 109 Gene3D Cytochrome P450 9 100 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00238 109 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 41 50 IPR017972 GO:0005506|GO:0016705
Rops9g00238 109 PRINTS E-class P450 group IV signature 48 66 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00238 109 PRINTS E-class P450 group IV signature 7 25 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00238 109 PRINTS E-class P450 group IV signature 32 48 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00238 109 SUPERFAMILY Cytochrome P450 11 93 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00238 109 PANTHER OS08G0105600 PROTEIN 11 92 - -
Rops9g00238 109 Pfam Cytochrome P450 11 65 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00238 Rops-Chr9 2853567 2853896 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00238 13 93 Cytochrome P450 AT2G45570 48.235 2.13e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00238 - - gmx:606548 125.176