Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00234 ATGGCTCTTCAGGAACTGAAATTTCTAAAAGCGGTGATCAAAGAAACTTTGAGATTACATCCTCCTGCTCCTTTGCTAGTTCCAAGAGAGTGTGATCAAACTTGTGAGATCAATAGATATACAATTCCAGCTGGAACACGAGTGTTTGTAAATGCCTGGGCAATTGGAAGAGACTCAAAGTACTGGAGCGAAGGAGAGAAATTTTATCCTGAGAGATTCCTGGATTGTCCAATTGACAACAAGGGGTCCAATTCTGAATTCATACGATTTGGTGCAGGAAAGAGAATATGTCCTGGCATTTTGTTTGCTCTACCTAGTATAGAACTTCCTCTTGCACTATTGCTGTACTATTTTGATTGGGAACTTCCCTTTGGAACCAGTCATGAAAATTTTGACATGACTGAAGCTTTTGTTACTACACTTAATTTTCTTTGGAATAATCTTCAACAAAATTCTTTTTAG 462 0.381 MALQELKFLKAVIKETLRLHPPAPLLVPRECDQTCEINRYTIPAGTRVFVNAWAIGRDSKYWSEGEKFYPERFLDCPIDNKGSNSEFIRFGAGKRICPGILFALPSIELPLALLLYYFDWELPFGTSHENFDMTEAFVTTLNFLWNNLQQNSF* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00234 153 Gene3D Cytochrome P450 1 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00234 153 PRINTS E-class P450 group I signature 87 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00234 153 PRINTS E-class P450 group I signature 51 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00234 153 PRINTS E-class P450 group I signature 97 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00234 153 PRINTS E-class P450 group I signature 10 28 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00234 153 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 90 99 IPR017972 GO:0005506|GO:0016705
Rops9g00234 153 PANTHER OS08G0105600 PROTEIN 3 140 - -
Rops9g00234 153 PRINTS P450 superfamily signature 97 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00234 153 PRINTS P450 superfamily signature 11 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00234 153 PRINTS P450 superfamily signature 88 97 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00234 153 SUPERFAMILY Cytochrome P450 3 140 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g00234 153 Pfam Cytochrome P450 3 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00234 Rops-Chr9 2833277 2833912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00234 3 141 Cytochrome P450 AT3G26230 53.237 1.48e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00234 - K23807 lja:Lj0g3v0171809.1 206.838