Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00228 ATGCTTGCACCCCATGAATCTACAACCGCTCTTGTTGTTTCCAAGTTCATCCTTTCTAAACTAATATGCCACCAACCGTCTCTTATTGTGGATTTAGCAGAAGGTGGTAATGATCATGGCCATGGTGGTGTTAGGAATTACATCAGTTGGGAAGATTTGCTTGTGGATGAGCCAAGTTTAGCTTTGAAATCCAATAACGAGTTTCGAGTTATTGTGGTTGATCAACATGGTAGGGGACATTCCAAAACTGTTCAAGGAGCAGTGGATATGGTTCCAGATCACAACAAACAAAGGGTCAAAATATTCATTCAACCAGGACTTTACAGAGAAAGAGTGCTTGTGCCAAACACCAAGCCTTATATATCATTTATAGGTAAAAGAAATGAAACAGCAGGTGCTGTAATTACTTGGAACAGTAAGTCATCTGATAGAGGTCCAGATGGCCAAGCATTGGGCACCTATGGTTCAGCAACTGTAGCAGTAGAATCAGATTATTTCTGTGCAACTCAGGTCACTTTTGAGAACACAGTGGTTGCAGCACCTGGTGGAAAAGGAATGCAGGCAGTGGCACTGAAGGTAGACAGTAATAGAGCCATGTTTTATAGAGTTAAGATTAAAGGAACACAAGACACTCTCTTGGACAACACAGGAACACATTACTTCTACAGGTGTATCATCCAAGGAAAAGTAGATTTTATCTTTGGCAGTGCAAAATCACTCTATGAGAAGTGTCGTCTTCAATCAATAGCTGAGAACTATGGAGCAATTGCAGCACATCACAGGGATTCACCACATGAAGATACAGGCTTTTCTTTTGTAGGATGTAATATTAGAGGAAGTGGCAATGTGTACCTTGGAAGAGCATGGGGGGACTACTCAAGAATAATATACTCAGATTGTAATATGGATGATATAATTAATCCTGAAGGATGGTCAGAATGGAATCATCCAGAAAGAAAAAGGACTGCAGTGTTTGGTGAGTATCAATGCCATGGAAGAGGAGCAGATAGAAGATATAGGGTGCCTTGGTCAAAATCATTCAGTTATCAGGAAGCAAAGCCTTTCTTGGACAAGAGATTCATAAATGGAGACAAGTGGCTCAGACTGTAG 1110 0.4081 MLAPHESTTALVVSKFILSKLICHQPSLIVDLAEGGNDHGHGGVRNYISWEDLLVDEPSLALKSNNEFRVIVVDQHGRGHSKTVQGAVDMVPDHNKQRVKIFIQPGLYRERVLVPNTKPYISFIGKRNETAGAVITWNSKSSDRGPDGQALGTYGSATVAVESDYFCATQVTFENTVVAAPGGKGMQAVALKVDSNRAMFYRVKIKGTQDTLLDNTGTHYFYRCIIQGKVDFIFGSAKSLYEKCRLQSIAENYGAIAAHHRDSPHEDTGFSFVGCNIRGSGNVYLGRAWGDYSRIIYSDCNMDDIINPEGWSEWNHPERKRTAVFGEYQCHGRGADRRYRVPWSKSFSYQEAKPFLDKRFINGDKWLRL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00228 369 Gene3D - 66 369 IPR012334 -
Rops9g00228 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 63 368 - -
Rops9g00228 369 SUPERFAMILY Pectin lyase-like 70 367 IPR011050 -
Rops9g00228 369 FunFam Pectinesterase 66 369 - -
Rops9g00228 369 Pfam Pectinesterase 71 364 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00228 Rops-Chr9 2794627 2796827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00228 21 321 Carbohydrate Esterase AT5G55590 56.386 1.14e-129 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00228 K01051 - gmx:100804220 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00228 9 2794627 2796827 Rops9g00228 9 2794627 2796827 ECH