Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00184 ATGCTCATGGAAAACGGTAGAGAGGATGAGATTGAGGACATGTCAATGTCACCCCCATCCTTGGGCTCTATGCAGATTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCCTACCTTCGGAATAGGTACTCAGAGATTGACATAAAAGTTGAGGATTCCAATTTCAACCAAGATCCACCTCTTCCAGTATATCTCAAGTTTGAAGATGTAGAGTATAAGGTGACAAATAGCCAAGCAGCTTCCAATAGCCCTGTGCAGACAATGGTGTCAAAGGTAGCCACACAACTCCACGTGGAAGAAGATAAATACAAGAAAATTTTGAAGGGTATCACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGGAAGACAACCTTGTTAAGAGTTGTGGGAGGAAGATTACTTGACAATGTAAAGGGAAAGATAACATATAATGATGTTCAATATAATCCGGCTGTCAAGAGAAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTCCCGCAACTTACAGTAGAAGAAACATTAATCTTCTCTGCATTCTTAAGGTTACCAACCAACATGAGCAAGCAACAAAAATATGCTAGAGTGGAGACCACTATCAAGGATCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATTTTACAAAGGCATATCAGGAGGAGAAAGGAAGCGAACCAGCATAGGCTACGAAATTCTTGTTGATCCTTCACTGTTGCTACTTGATGAGCCAACTTCAGGCCTTGATTCCACCTCCGCAAACAAACTCCTCATCACTCTTCAGGGACTCGCCAAGGCTGGAAGGACCATAATCTCAACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTAATATCAGAAGGCTATCCCATTTACTATGGGAAGGCCGGAGACTCAATGGAGTACTTTTCATCCTTGAGGCTCATACCGGAAATACCAATGAATCCTGCAGAGTTCTTGCTTGACTTGACAACTGGACAAGTGAATGATATAAGTGTTCCACAAGATATTTTGGAAGATCAAGAATCTACTGAGCCTTCAAAAGCTGTTATTAAGTATCTACAACTCAAGTATAAGAACATACTGGAGCCAAAAGAAAAAGAAGAGAATCATGGACCAGCAAACACACCAGCACATCTTCAACAAGCCATTCAGGTTAAAAAGGAGTGGACATTGAGTTGGTTGGACCAATTCATTATTCTTTATAAGAGAACATTCCGAGCAAGATGCAAGGAATATTTTGATAAATTAAGGCTGGTTCAAGCACTCGGAATTGCACTTTTGTTGGGGTTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAACTTAGAGATCAGGTTGGTTTAATGTTTTATATCTGTATATTCTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTCTTTCCATTTGAAAAGGTCTACTTGGTAAAAGAAAGGAAAGCAGACATGTATAGACTAAGTGTGTACTATGCAAGCAGCACTCTGTGTGATATGGTGGCGCATGTTTTGTATCCTACCGTTTTCATGCTTATCTTGTACTTCATGGCTGGCTTTAAGAGTACTATCGCTTGCTTCTTCCTGACATTGTTCTCAGTGTTGCTTATAGCTATAACAAGTCAAGAGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCGGGAATGGTTGCTTCTTTGATACTAATGTTATTCCTTCTAACAGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGCAATGGTTGAAGTATTTGTCGTTCATGTACTACGGATTCAGGCTTCTTCTGAAAGTGCAGTATTCAGGAGACCAACTATACGAGTGTGAAAGCAAAGGAGGGTGTAGGACCCTGCAGAGTTCACCTTCATTTGACTCTGTGAACTTGAAAGGAGGCTTAAGTGAAGTATGGGTTCTGCTAGCCATGGCTCTATGCTTCCGCTTGTTTGCTTACTTCTGTCTCCGCAGACGAATTGACATCTGCAATTAG 2067 0.417 MLMENGREDEIEDMSMSPPSLGSMQIAGSNGFGHSMEFMSQAYLRNRYSEIDIKVEDSNFNQDPPLPVYLKFEDVEYKVTNSQAASNSPVQTMVSKVATQLHVEEDKYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDNVKGKITYNDVQYNPAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSKQQKYARVETTIKDLGLERCRHTKIGGGFYKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLITLQGLAKAGRTIISTIHQPSSRIFHMFDKLLLISEGYPIYYGKAGDSMEYFSSLRLIPEIPMNPAEFLLDLTTGQVNDISVPQDILEDQESTEPSKAVIKYLQLKYKNILEPKEKEENHGPANTPAHLQQAIQVKKEWTLSWLDQFIILYKRTFRARCKEYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYASSTLCDMVAHVLYPTVFMLILYFMAGFKSTIACFFLTLFSVLLIAITSQEAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYLSFMYYGFRLLLKVQYSGDQLYECESKGGCRTLQSSPSFDSVNLKGGLSEVWVLLAMALCFRLFAYFCLRRRIDICN* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00184 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 326 IPR027417 -
Rops9g00184 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 57 675 - -
Rops9g00184 688 FunFam ABC transporter G family member 22 99 328 - -
Rops9g00184 688 Pfam ABC-2 type transporter 419 627 IPR013525 GO:0016020|GO:0140359
Rops9g00184 688 SMART AAA_5 121 312 IPR003593 GO:0016887
Rops9g00184 688 Pfam ABC transporter 112 262 IPR003439 GO:0005524
Rops9g00184 688 Gene3D - 97 328 IPR027417 -
Rops9g00184 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 334 IPR003439 GO:0005524
Rops9g00184 688 Pfam ABC-2 type transporter 291 352 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00184 Rops-Chr9 2285121 2288246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00184 110 295 Calmodulin-binding Proteins AT2G36910 29.843 1.86e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00184 K05681 - gmx:100815259 1206.43