Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00171 ATGCCACAAGAGAGCTTAGCAAACTCATTTTACACATCTCCTTTCAAGAGAGGGTTGAATTTGAAGGGTTTGGACTTCAACAACAATGAGGCTTCATACACTGTGATGGAGGAGAGCATCAATGATCATGAATTGGCTCAGAGAAAAGCAGAGGAAGCAGCTTCAAGGAGATATCAAGCAGCAGAATGGCTTCGTCAAATGGATGATGGAGCTTCTTCTTCACTCTCCAATGAACCCTCTGAAGAAGAATTCTGTCTTGCACTTCGCAATGGCCTCATTCTCTGCAATGTCCTCAACAAAGTCAATCCTGGTGCTGTCCTCAAGGTGGTGGAGAATCCCATTCTTACAGTTCAGTCTACAGAGGGAGCAGCGCACTCTGCAATTCAGTATTTTGAGAACATGAAAAACTTTGTAGATGCTGTTAAGGATATGAAGCTTTTGACTTTTGAAGCTTCGGATTTGGAAAAGGGGGGTTCTTCAATTAAAGTTGTGGATTGCATTCTCTGTTTGAAAGGATATTCTGAATGGAAGCTATCAGGTGGAGTTGGGGTGTGGAGATACGGAGGAACTGTCAGGATTACTTCCTTCCCTAAAGGAACTCCTCCTTCCTCCATAGTGGACAGTGAAAGTGCTGATGAGTCCCTGGATGAGTCTGAGTCCTCACAGTATGAACAGCTACTTGAATTTCTTCATATATCTGGAGAGGTCTCAATTGAAGAAACTAAAACTGCCAATGCTCAGGCTTTCCTATTTGATCACTTTGTACTCAAACTTCTCCAGGCTTACCTCAGAGAGAATGATGGGATTGAAGATCTGCCGCTGAATGCAATGGTAATTGATGCTTTGCTCCGAAAGGTAGTCAGGGATTTTTCAGCATTGCTTGTTTCTCAAGGAGCTCAGCTTGGTCGTTTCCTCAGGAAAATATTGAAAGGAGACATTGGTTGCCTCTCCAAGAGAGAATTCGTAGAAGCTATCACAATATATCTTAATCAAAGAAGTAGTTTGGCATCAAATGATTTCTCTAAATTCTGCACTTGTGGCGGAAAACTTGGTAGTACTCAGCATAATGTCAACTATTCTGCCAAGCATGCTGAAATAATCGATGCTCAACAGAAACAACTTGAGGGAATGAAGCACTCCTTTGAAGAGATAAAACTGGAGGTCAAACAGATTCAATCTCAATGGGACAAAGAGTTGAGTAGGCTAGAGAATCATATAAAAAGCCTTGAAGTGGCCTCCTCTTCCTACCACAAAGTTTTAGAGGAGAACCGTTTTCTTTACAATCAAGTGCAAGACCTCAAAGGAGCCATTAGGGTCTACTGTAGAGTAAGGCCCTTCTTACCAGGACAATCAAATGGACAATCTGCAGTGGATTATATAGGAGAAAATGGAAACATAATGATTGTAAATCCCCTTAAGCAGGGAAAAGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGCAACAAATGTCACACAAGAACAAATATATGCTGATACCCAACCATTGGTCAGATCTGTTTTAGATGGCTATAATGTATGCATCTTTGCATATGGACAGACTGGCTCAGGAAAGACCTACACAATGAGTGGCCCTGATCTGATGACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTCATATATCAAAGGAAAGAGCAGATGCCATAAAATATGAAGTTGGCGTCCAGATGATTGAAATATATAATGAACAAGTGAGAGATTTATTAGTTAGTGATGGCTCTAACAGAAGATTAGATATACGAAACAACTCTCAATTGAATGGTCTAAATGTGCCTGATGCATATTTAGTTCCGGTTAATTGTACTCAAGATGTTCTTGATTTGATGAGAATTGGTCAGAAGAATCGTGCTGTGGGAGCTACAGCTCTAAATGAGCGAAGCAGCCGTTCCCATAGTGTATTGACAGTTCATGTCAGAGGGAGGGACATGGTTTCTAACTCCATTCTCAAAGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGGGTGGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCTCAACATATTAATAAATCGCTTTCTGCACTTGGAGATGTTATCTCTGCTTTGGCACAGAAGAGTCCACATATTCCTTACAGAAATAGCAAGCTTACACAAGTTTTACAAGATTCATTAGGTGGCCATGCAAAAACCTTGATGTTTGTTCATATAAATCCTGAACCAAATGCTTTTGGGGAGACAATTAGCACGCTGAAGTTTGCTAAGAGGGTTGCATCCATTGAACTTGGAGCTGCTCAATCTAACAAAGAAACTGGTGAAATCCGAGAGCTAAAAGAAGAGATATCAAATATCAAATTGGCATTGGAGAGGAAGGAAACTGAACTGGAACAATGGAAATCTGGGAATGCACGAAATGCCACGGAATGTCAGAAACCAAGAGCTGTTTCACCTTTTCGTTTGCCCAAAAATGGTACCAGTGGCAGCATGAAGCCTGAAAATTGTCTAAGATCCATGGATGATAGAAGCTCTGAGGCTAAAAGTTGTTCTTCGGGTAAGCAGAAAAGGTCAAGATTTCCCTCAACATTTATCGACAAGGACTCCATGCCAAAAATGTCTCTTCTGGCTGAAGAAAGATCAGTCAGCTCAGGGAAGGGTAGATCACCATCACCATCACCACCAATCAGGAGATCAATATCCACTGATAGAGGGTCCAGCATTAAAAGCAAGCTCAAAAATGACACAACAGACAACCAACCAATGTCAAAGCATCCATTTTCAGCTAGAGTACCAGTAAATAAATCTCTTGCCACAATGCCAATGGCCCTATCTACAGAGAATAACTCAAGGGCATATGTGCATTCACAGGAGCCAGTGAAGCAGGATAACATTTCTGAAAATCTCTTCAACCTCCAAAAGGTAAACTCCAGGAAAGTTCATCAAGAATATGAAGAGGAACAGTTCAAGCAAGCATTTGATGTAGTAAGGCAAAGCGGTATTAGGAAAAGCAAGGCTGATAATAAAACCAAGGTCAAGCATCATCAGAGATTGCCCTTTAGGATTCAAAAGACTGATCATATACCTACATTGATTCCTGACATGGAAGTTGCTGGTGCAATGACTGTGGAGGCACCTCGAAAGAGTGATTACTCTGAGCCAGAAAATGATCTCAGCTTCATGGAGTCTGCAGTCCATGGTGTATTAAATCTTAAAATGACACGTCATAACATCTCAAAGAATTCTCAGAACCTTGAATCAAGAGGAACAGTGCAAGCAGCTGAGCCTTTGTTGACTAGCAAAGTTGAAAACAAACTTTTAAATGGTTCAGGTCGAAATCTTAAGGAAGGCACCAACACTTCCATGCATGAATTTAAACGGAGCCGATCTACACCACGTGGAAAGTTTTCTGTTTTATCTTGA 3429 0.4121 MPQESLANSFYTSPFKRGLNLKGLDFNNNEASYTVMEESINDHELAQRKAEEAASRRYQAAEWLRQMDDGASSSLSNEPSEEEFCLALRNGLILCNVLNKVNPGAVLKVVENPILTVQSTEGAAHSAIQYFENMKNFVDAVKDMKLLTFEASDLEKGGSSIKVVDCILCLKGYSEWKLSGGVGVWRYGGTVRITSFPKGTPPSSIVDSESADESLDESESSQYEQLLEFLHISGEVSIEETKTANAQAFLFDHFVLKLLQAYLRENDGIEDLPLNAMVIDALLRKVVRDFSALLVSQGAQLGRFLRKILKGDIGCLSKREFVEAITIYLNQRSSLASNDFSKFCTCGGKLGSTQHNVNYSAKHAEIIDAQQKQLEGMKHSFEEIKLEVKQIQSQWDKELSRLENHIKSLEVASSSYHKVLEENRFLYNQVQDLKGAIRVYCRVRPFLPGQSNGQSAVDYIGENGNIMIVNPLKQGKDARRVFSFNKVFATNVTQEQIYADTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDAYLVPVNCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRDMVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEPNAFGETISTLKFAKRVASIELGAAQSNKETGEIRELKEEISNIKLALERKETELEQWKSGNARNATECQKPRAVSPFRLPKNGTSGSMKPENCLRSMDDRSSEAKSCSSGKQKRSRFPSTFIDKDSMPKMSLLAEERSVSSGKGRSPSPSPPIRRSISTDRGSSIKSKLKNDTTDNQPMSKHPFSARVPVNKSLATMPMALSTENNSRAYVHSQEPVKQDNISENLFNLQKVNSRKVHQEYEEEQFKQAFDVVRQSGIRKSKADNKTKVKHHQRLPFRIQKTDHIPTLIPDMEVAGAMTVEAPRKSDYSEPENDLSFMESAVHGVLNLKMTRHNISKNSQNLESRGTVQAAEPLLTSKVENKLLNGSGRNLKEGTNTSMHEFKRSRSTPRGKFSVLS* 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00171 1142 Pfam Calponin homology (CH) domain 55 174 IPR001715 GO:0005515
Rops9g00171 1142 ProSiteProfiles Calponin homology (CH) domain profile. 54 175 IPR001715 GO:0005515
Rops9g00171 1142 MobiDBLite consensus disorder prediction 838 855 - -
Rops9g00171 1142 MobiDBLite consensus disorder prediction 803 929 - -
Rops9g00171 1142 SMART ch_5 56 173 IPR001715 GO:0005515
Rops9g00171 1142 Coils Coil 771 798 - -
Rops9g00171 1142 FunFam kinesin-like protein KIN-14F 431 805 - -
Rops9g00171 1142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 801 IPR027417 -
Rops9g00171 1142 MobiDBLite consensus disorder prediction 1110 1142 - -
Rops9g00171 1142 SUPERFAMILY Calponin-homology domain, CH-domain 50 195 IPR036872 -
Rops9g00171 1142 Coils Coil 36 56 - -
Rops9g00171 1142 Coils Coil 367 412 - -
Rops9g00171 1142 Gene3D - 46 175 IPR036872 -
Rops9g00171 1142 Gene3D Kinesin motor domain 378 766 IPR036961 -
Rops9g00171 1142 FunFam kinesin-like protein KIN-14F 46 175 - -
Rops9g00171 1142 ProSiteProfiles Kinesin motor domain profile. 436 764 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops9g00171 1142 Pfam Kinesin motor domain 442 764 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops9g00171 1142 SMART kinesin_4 434 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops9g00171 1142 PANTHER KINESIN-LIKE PROTEIN KLP-3 61 946 IPR027640 GO:0003777|GO:0007018
Rops9g00171 1142 CDD CH_AtKIN14-like 56 171 - -
Rops9g00171 1142 CDD KISc_C_terminal 434 766 - -
Rops9g00171 1142 PRINTS Kinesin heavy chain signature 511 532 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops9g00171 1142 PRINTS Kinesin heavy chain signature 665 683 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops9g00171 1142 PRINTS Kinesin heavy chain signature 714 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops9g00171 1142 PRINTS Kinesin heavy chain signature 634 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops9g00171 1142 MobiDBLite consensus disorder prediction 886 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00171 Rops-Chr9 2178820 2187198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00171 372 764 Calmodulin-binding Proteins AT5G65930 39.547 6.90e-75 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00171 K10406 - gmx:100811516 1767.28