Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00169 ATGCTTCATGAACTAAAGCTTGAACACCCAAAAGGAGGAATCGCTAGGAGTGAAAAAGATGCCCTTTCCATTGCAGCAGACATTGGATACCCGGTTGTTGTTCGCCCTTCTTATGTTTTGGATGGTCGAGCAATAGAGATTGTATATAGCGACGAAAAACTTGTGACTTACCTTGAAAATGCTGTTGAGGTGGATCCAGAACTCCCTGTATTAATCGACAAGTATTTATCTGATGCCTGTGAGATCGATGTTGATGCACTGGCTGACTTGCATGGCAATGTGGTAATTGGTGGGATAATGGAGCACATTGAACAGGCTGGGATACGTTCTGGTGACTCTGCTTGCTCTATTCCCACAAGAACTGTCCCAACTTCTTGCTTGGAGATAATCAGGTCATGGACTAAAAAGTTGGCCAAACGACTGCATGTGTGTGGGCTTATGAATTGTCAATATGCAATCAGGGGAGTACTGGTTATTGTTGATGTCGTCATCAACAATGGTCCACGTGAAGATGCAACTCGAATTGGTTCTGCTGGAGTTGTTAGGAGACCGACTGTGGATATCTCACCCCTGCGTCGTGTTAATCAAGCCACCTACCATACAGATGAACCATACACATGGAGACCCTTTGATGCCTCCACACCATGCACACGTGGACGAGTGATGTTGTTGCATATGATGCACAACTCTCTTAAAGAAGGCACCACACACGTACAGATTCATGGGTGA 729 0.4527 MLHELKLEHPKGGIARSEKDALSIAADIGYPVVVRPSYVLDGRAIEIVYSDEKLVTYLENAVEVDPELPVLIDKYLSDACEIDVDALADLHGNVVIGGIMEHIEQAGIRSGDSACSIPTRTVPTSCLEIIRSWTKKLAKRLHVCGLMNCQYAIRGVLVIVDVVINNGPREDATRIGSAGVVRRPTVDISPLRRVNQATYHTDEPYTWRPFDASTPCTRGRVMLLHMMHNSLKEGTTHVQIHG* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00169 242 Gene3D - 1 169 - -
Rops9g00169 242 ProSiteProfiles ATP-grasp fold profile. 1 199 IPR011761 GO:0005524|GO:0046872
Rops9g00169 242 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 4 154 IPR005479 GO:0005524
Rops9g00169 242 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 1 159 - -
Rops9g00169 242 PANTHER CARBAMOYLTRANSFERASE FAMILY MEMBER 1 158 - -
Rops9g00169 242 SUPERFAMILY Ribosomal protein S7 148 199 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00169 Rops-Chr9 2166984 2167942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00169 109 199 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 44.086 7.62e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00169 K01955 - gmx:100819867 276.944