Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00165 ATGACCGATTCTATATACAAAGTGGAAACCATGCTGTGTCGTTTCGCTCAATGGAAAATCCACCACTTTGATTCCTGCACCTACCGCAAATCCGAACCTTTCAAGATAGGCAATTGGACTTGGCATTTATCAGTGGAGAAGAACAAGGTTTCAAGTGTTACGTTATACCCAGAAAAATTCAATAATAAAATGAAAGTCGATCCCCCGATTGCATCTTTCATCATCCGGGTGCTTAGTTCTGCTGGAAATAGCAATGCCTTCGTCCATTCAGAAATCGTAGACAGACCCTTTACCGATACCGAAGGCTTTGTTTTGATGATTGAGGTTCCACTGCCAGGGAAATTCATTATTGACATTGAGTTCTTGGATTTGAAGATGACTCCATCCCTAAAAGGTGGAGTACCTTGCTCTATCTGGCCTGATAGATTTTATGAGGAAGTATCGGAATTGGCAGTAATTGTGCATCCTGATAGAACACTAGAAGAAGGAATCCACACAGACATCACAATCAGTGTTGATTCATCTGAGGAAAGCATAGGAGCCCATAAGGCTATTCTTGTTGCTCGATCGCCTGTCTTCCGCAGCATGTTCTCTCATAATCTTAAGGAGAATGAGGAGTCTGTCATAAACATCTCAGACATGTCAATTGAAGCTTGCAGGGTATTGCTGAATTATCTTCATGGGTACATCCAAAAGGAAGAATTCATGACACATAGGGTGGCCCTGCTGCTTGCAGCTGACAAGTATGACTTAATTGACTTGAGAGAGACATGCCTTGAGAGTCTTCTAGAAGACGTTGATGCAAACAATGTGCTTGAAAGGCTCCAAATTGGATGTCTGTATCAGTTGCCAAAGTTGAAGAATGGTTGTATGCAATATCTTGTGAAACTTGGTAAAATATTTGACATTCGGGATGATTTCACTGCATTCTTGCAAAGTGCAGACAGGGAACTGATTTCTGAAGTCTTCAATGAAGTTCTTGATGCCTGGAAAGGATCATGA 1002 0.4152 MTDSIYKVETMLCRFAQWKIHHFDSCTYRKSEPFKIGNWTWHLSVEKNKVSSVTLYPEKFNNKMKVDPPIASFIIRVLSSAGNSNAFVHSEIVDRPFTDTEGFVLMIEVPLPGKFIIDIEFLDLKMTPSLKGGVPCSIWPDRFYEEVSELAVIVHPDRTLEEGIHTDITISVDSSEESIGAHKAILVARSPVFRSMFSHNLKENEESVINISDMSIEACRVLLNYLHGYIQKEEFMTHRVALLLAADKYDLIDLRETCLESLLEDVDANNVLERLQIGCLYQLPKLKNGCMQYLVKLGKIFDIRDDFTAFLQSADRELISEVFNEVLDAWKGS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00165 333 CDD BTB_POZ_ZBTB_KLHL-like 165 249 - -
Rops9g00165 333 Pfam BTB/POZ domain 160 263 IPR000210 GO:0005515
Rops9g00165 333 PANTHER OS08G0495500 PROTEIN-RELATED 6 332 IPR044714 -
Rops9g00165 333 SUPERFAMILY POZ domain 156 264 IPR011333 -
Rops9g00165 333 Gene3D Potassium Channel Kv1.1; Chain A 147 295 IPR011333 -
Rops9g00165 333 SMART BTB_4 166 266 IPR000210 GO:0005515
Rops9g00165 333 ProSiteProfiles BTB domain profile. 166 227 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00165 Rops-Chr9 2066887 2068980 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops9g00165 BTB 1.6e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00165 K10523 - mof:131168130 416.001