Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00164 ATGAAAGTGCAACCATCCTATGCCATTGGAAAGTCCTACGTTGTTTACTTAGGAGCTCATTCTCATGGCCCATATCCTTCATCTGCTGATCTTGACTTGGCAACAAAGTCCCATTATAGTTTACTGGACTCAGTCCTGGGAAGCTATGAGAAAGCCAAGGATGCAATATTCTACTCCTATAATAGGCACATCAATGGTTTTGCTGCAGCATTAGAAGATGAAGAAGCACAGGAGCTTGCAAAAAATCCAATTGTAGTGTCTGTATTCTTGAACAAAATGCATCAACTGCATACAACCCGGACATGGGAATTTCTTGGACTAGAAAGAAATGGAATAGTTCCTAAGGACTCCACTTGGGAGAAGGCAAGATACGGTGAAGACACAATCATTGGTAACCTTGATACAGGTGTATGGCCAGAATCCAAGAGCTTTAATGACCAAGGAATGGGGCCCATTCCAACAAAGTGGCATGGGATATGTCAATTTGACAATTTTCATAGCCCAGCTAAAAAATATTGCAACAGGAAGCTGGTTGGATCAAGATTTTTCTACAAGGGTTATGAGGCACAAACTGGCAAACTCAATGCATCATTCTATACTGCACGTGACACCCAAGGCCATGGTACTCACACTCTGTCAACCGCTGGTGGTAATTTTGTTCCAGGGGTAAGTGTTTTTGGTAATGGTAATGGCACTGCCAAAGGTGGATCTCCAAAGGCTCGTGTTGCGGCCTACAAGGTGTGTTGGCCACAACATGGCATATACCTGGGTGGCTGCAATGATGCAGATATCTTAGCTGGTTTTGAGGCAGCCATAAGTGATGGTGTTGATGTGCTTTCAGTTTCTCTTGGTGGGATTCAGCCTGAAAATCTGTTTTCAGATTCTATTGCTATAGGTTCCTTCCATGCAGTTGTCAATGGTATAGTGGTTGTTAGTTCTGCAGGGAATAATGGACCATATAGGCCTATTCCTAGTGTGGCACCCTGGTTATTCTCGGTTGCTGCTAGCACAATGGATAGGGACTTCGCAAGTTATGTTGTGCTGGGAGATAAAAAGCAACTTAAGGGAACCAGTCTTTCATCTATGGTCTTGCCATCACAGAAGTTATATCCTTTGATTAATGCTGAGGATGCCACTGCAATGTCAGAAGATGCCAAATTTTTCGATGATGGAACACTTGATGCAGAAAAGGTGAAGGGAAAAATAGTGGTCTGCCAAAATATGTTTTGTGGAGCTTTCGAAGGCCCAGAAGCTTCTTCAGCAGGTGCAGTAGGAATGATTATGGTCAATGATGACAATAGCTTCTATGATTTTATAGCATTCCCTCATTTTTTACCTGCTTCACATGTCAATTACACGGATGGTGAATATGTTTATTCCTACATCAAACGTACAAAGAACCCTGTGGCTTACATAACTAAACCAAAAACAGAAATTCCAATAATTCCAGCTCCAGTGATTGCTTCATTCTCATCCAGGGGACCTAACATTATTCTGCCATCAATTCTAAAGCCTGACATCACTGCACCTGGAGTGAACATAATTGCTGCTTACTCAGAAGCCACAAGTGCATCTGGACTAGAATCAGATAATCGAAGGGTTCCTTTCAATTCAATGTCTGGAACTTCCATGTCATGCCCCCATGTCGCTGGCATTGTGGGCCTTCTCAAAACACTTCATCCTGAATGGAGTCCAGCAGCTATCAAATCAGCAATTATGACCACTGCAAGCACAATGGATAACAGCAAAAGACCTATCACGGATCGATTCCATGAAGAAGCAACTCCATTTGCATATGGCTCTGCAATTTTTGAATCCATGCTTAGGGCCATTACTGTGTTTTATAACATAATCAACAACTTAAATGTAAAGCTAGCTATGTATGAGCTCAAATCTCAATCATCTGTCCCCCACGTTTAA 1920 0.4229 MKVQPSYAIGKSYVVYLGAHSHGPYPSSADLDLATKSHYSLLDSVLGSYEKAKDAIFYSYNRHINGFAAALEDEEAQELAKNPIVVSVFLNKMHQLHTTRTWEFLGLERNGIVPKDSTWEKARYGEDTIIGNLDTGVWPESKSFNDQGMGPIPTKWHGICQFDNFHSPAKKYCNRKLVGSRFFYKGYEAQTGKLNASFYTARDTQGHGTHTLSTAGGNFVPGVSVFGNGNGTAKGGSPKARVAAYKVCWPQHGIYLGGCNDADILAGFEAAISDGVDVLSVSLGGIQPENLFSDSIAIGSFHAVVNGIVVVSSAGNNGPYRPIPSVAPWLFSVAASTMDRDFASYVVLGDKKQLKGTSLSSMVLPSQKLYPLINAEDATAMSEDAKFFDDGTLDAEKVKGKIVVCQNMFCGAFEGPEASSAGAVGMIMVNDDNSFYDFIAFPHFLPASHVNYTDGEYVYSYIKRTKNPVAYITKPKTEIPIIPAPVIASFSSRGPNIILPSILKPDITAPGVNIIAAYSEATSASGLESDNRRVPFNSMSGTSMSCPHVAGIVGLLKTLHPEWSPAAIKSAIMTTASTMDNSKRPITDRFHEEATPFAYGSAIFESMLRAITVFYNIINNLNVKLAMYELKSQSSVPHV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00164 639 Pfam Subtilase family 125 587 IPR000209 GO:0006508|GO:0008236
Rops9g00164 639 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 97 IPR037045 -
Rops9g00164 639 CDD Peptidases_S8_3 94 577 IPR034197 -
Rops9g00164 639 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 50 602 IPR045051 -
Rops9g00164 639 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Rops9g00164 639 Pfam PA domain 387 456 IPR003137 -
Rops9g00164 639 Pfam Peptidase inhibitor I9 12 97 IPR010259 -
Rops9g00164 639 Gene3D Peptidase S8/S53 domain 127 601 IPR036852 GO:0004252|GO:0006508
Rops9g00164 639 FunFam Subtilisin-like protease SBT1.5 127 351 - -
Rops9g00164 639 SUPERFAMILY Subtilisin-like 96 586 IPR036852 GO:0004252|GO:0006508
Rops9g00164 639 CDD PA_subtilisin_like 345 472 - -
Rops9g00164 639 FunFam Subtilisin-like protease SBT5.3 1 97 - -
Rops9g00164 639 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Rops9g00164 639 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Rops9g00164 639 PRINTS Subtilisin serine protease family (S8) signature 125 144 IPR015500 -
Rops9g00164 639 Gene3D - 339 479 - -
Rops9g00164 639 ProSiteProfiles Serine proteases, subtilase domain profile. 101 614 - -
Rops9g00164 639 FunFam subtilisin-like protease SBT1.5 339 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00164 Rops-Chr9 2062243 2066368 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00164 5 601 Subtilisin-like Serine Gene Family AT5G59810 58.043 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00164 - - pcin:129318364 768.074