Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00163 ATGGAGCACATTGATGTGATGAATAAAAGACTTAAGAGAAGCATTCAAGAAGCTGATAGGGTGAGTGGTGATCCTCCTCCGTGTAGAGTCTACACACAATGTCGTCTCGCCCAATGCAGAGTTTACGACTTTCCAACCTCCACTCGCTGCAAATCCGAATCTTTCAAGATGGGCAATTGGACTTGGCATTTAAGGGTGGAGGAGATCAAGGATGTATATGTTGTAAGGCAATCAACGGTGAAGAATATCAATATTGCATTATACCCAGAAATGTGTGAAGAACTGAAAGACAAACCCCCCATTGCATCTTTCATAATTCGGGTGCTTGGTTCTAATGGAAATACCAATGTCTTGGCCAGATCAGAAATCAAAGAAAGGTACCTTACTTATACCCACGGCTTTGTTTGGAGTAGGGTTCAACTGCCAGGGAAATTCATTATTGAAATTGAGTTCTTGGATTTGAAGACTTCATGCCCAAATGGTGGAGTACCTTGCTCTATCTGGCCTGACAAGTATTCTCAGCGAATATCAGAAGCATCAGCCCTTGCTTGTTTTGGTCGAATCCTAAAAGAAAGAATCCACACAGACGTCACAATCAGAGTCAATTCACACGAGGAAAGCATAAGAGCCCATAAGGCTATTCTTGTTGCCCGGTCACCTGTCTTCCACAATATGTTCTCTCATAATTTTAAGGAGAATGATGAGTCTATCATAAACATTTCAGACATGTCCATTGAAACTTGTCATGCATTTCTAAATTATCTTTATGGCATTTTTAAAGATGACGAATTTATGACACATAGGGTCACCCTACTGCATGCAGCTGACAAGTATGACATAGTTGACTTGAAAATTGCATGTGGTCTGAGTCTTCTAGAAGATATTGATGCAAAAAATGTACTTGAAAGGCTCCAAATTGCATGTATGTATCAATTGCCAGAGCTGAAGAATTATTGTATGCAATATCTTGTGAAATCTCGTAAGATATTTGACATTCGGGATGATTTCACTGCCTTCTTGCAAAATGCAGATAAAGATTTGATTTCTGAAGTTTTCAATGAAGTTCTTGATGCCTGGAAAGGATCATGA 1089 0.3958 MEHIDVMNKRLKRSIQEADRVSGDPPPCRVYTQCRLAQCRVYDFPTSTRCKSESFKMGNWTWHLRVEEIKDVYVVRQSTVKNINIALYPEMCEELKDKPPIASFIIRVLGSNGNTNVLARSEIKERYLTYTHGFVWSRVQLPGKFIIEIEFLDLKTSCPNGGVPCSIWPDKYSQRISEASALACFGRILKERIHTDVTIRVNSHEESIRAHKAILVARSPVFHNMFSHNFKENDESIINISDMSIETCHAFLNYLYGIFKDDEFMTHRVTLLHAADKYDIVDLKIACGLSLLEDIDAKNVLERLQIACMYQLPELKNYCMQYLVKSRKIFDIRDDFTAFLQNADKDLISEVFNEVLDAWKGS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00163 362 Pfam BTB/POZ domain 189 291 IPR000210 GO:0005515
Rops9g00163 362 PANTHER OS08G0495500 PROTEIN-RELATED 29 361 IPR044714 -
Rops9g00163 362 SMART BTB_4 195 295 IPR000210 GO:0005515
Rops9g00163 362 CDD BTB_POZ_ZBTB_KLHL-like 194 278 - -
Rops9g00163 362 Gene3D Potassium Channel Kv1.1; Chain A 170 325 IPR011333 -
Rops9g00163 362 SUPERFAMILY POZ domain 180 291 IPR011333 -
Rops9g00163 362 ProSiteProfiles BTB domain profile. 195 256 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00163 Rops-Chr9 2023772 2026008 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops9g00163 BTB 1e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00163 K10523 - gmx:100790186 372.859