Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00160 ATGACCCATGGCACTCTTTTTATCCTTAACATTTTTTCCCTTGATATCTCACAGTGCATTGGAAATTCTGAGAATGATGTCACAGAAGATGATAATTTAGAAAGAAATTTAGAGGATGCTTCAACACATGCTCTTCATGGTCATGAGCACCATAACCTTAATCCTAGTATTGGATTGGAATTTGACTCTCTTGATGATGTTAAAAATTTGTACAAAGCATTTGCTAAGGAAGAGGGCTTTGGAATTCGCACCCGTTCAAGTAAGCAAAATTTATGCATACTTGTGTGTTCTAATGTTGGTCAGTGCCCAGTCAATAGTAGTGGTGACGAAGAAAGCAATAAGGGAAAAGTTAAGAAAAGGTGCTCAACTTCAAGAACTGATTGCAAGGCATCACTTGTTGTTTCAAAAGCACGGAATAGAAAAAAATGGACTATCATTAGTTTTCACAATATTCATAATCATGTCATGGTTAGCCCTAAGAGTGTGAACTATCTTAGGTGTCATAAAAAGATGACTGCAGCAGCAAAAAACCTTGTTGAAAAGTTTGATCAAGAGGGCTTACCTACTGGAAAAGTTGCTGCAATGTTTAATAGTGGAGACTTATCTTTTTCTAATAGAGATTGTTGGAATAATCTTAGAGATCTTCGATGCAGGAATTTAGAGCTGCTGCATTCCATTTACGAAGTTGCAATATTTCCCTTCCAAGAACCGCCGCACGACGACGACGGTGGCGCGCGAGCTCCAAAGCTGGTCGGGGTGACGGGTGGAACCGGTTATCAGTCTCTGTATGGTGATGTTCCAACCCATAAGGTCAAAGTCCACGACAGACAACGAGGAACCGTTCACGAATTCCTCGTACCTGAGGGTTATGCACTTCTTTGTGTGGGCTTCCCATCCTCTGACGTTGAAGTAGAAACTCAAGATGAAGATGAGCTTCTCTCCGATAGATCTCCTTGTTTCCTTCTTCCGGTGTGCTTGTGTGACCATGTACACAGTTCCTTCCTTCTCCCTCTGTCCTTATTTTGTGGGTCTGGGTTAGTTTATTTAGGGTTTGAAGTAAAAATGGAGGATGTAAGTGTTAGTGAGGATTCTGTGCAATACATTGGTGAGCCATTCTCTGGTGAGGATACCACCGGCTCATCTTCCACTCATAGTGAGAGTAATAGTGAATTTAAGGAAAATACAAGTGGTCATGGTGGAGGTTCCATTCAGGAAATGGATATCGATGGTGCCAGGACGACGGTGGTTCAGGTTGTGCCGCTAATGAGGTGGCTGAACAGTCCCAAGCTTCTGAGGGTGGAGATGAGGCACCACGTTCAACTTTGA 1326 0.4238 MTHGTLFILNIFSLDISQCIGNSENDVTEDDNLERNLEDASTHALHGHEHHNLNPSIGLEFDSLDDVKNLYKAFAKEEGFGIRTRSSKQNLCILVCSNVGQCPVNSSGDEESNKGKVKKRCSTSRTDCKASLVVSKARNRKKWTIISFHNIHNHVMVSPKSVNYLRCHKKMTAAAKNLVEKFDQEGLPTGKVAAMFNSGDLSFSNRDCWNNLRDLRCRNLELLHSIYEVAIFPFQEPPHDDDGGARAPKLVGVTGGTGYQSLYGDVPTHKVKVHDRQRGTVHEFLVPEGYALLCVGFPSSDVEVETQDEDELLSDRSPCFLLPVCLCDHVHSSFLLPLSLFCGSGLVYLGFEVKMEDVSVSEDSVQYIGEPFSGEDTTGSSSTHSESNSEFKENTSGHGGGSIQEMDIDGARTTVVQVVPLMRWLNSPKLLRVEMRHHVQL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00160 441 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 208 - -
Rops9g00160 441 MobiDBLite consensus disorder prediction 371 401 - -
Rops9g00160 441 Pfam FAR1 DNA-binding domain 70 157 IPR004330 -
Rops9g00160 441 MobiDBLite consensus disorder prediction 369 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00160 Rops-Chr9 1973494 1974514 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops9g00160 FAR1 2.6e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00160 - - mtr:112422107 257.299