Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00159 ATGTACGGCACTATGAACCAGATCGAAGACAACGATGACGGCGACCACCACATTCATTACGATTCCCCTGCCCTCGAAGACGGTGGCGCCACCGACCCTGACATGTCTCTCCAACGCTGCGATGATTCCAGCCAACTCACGCTTTCGTTTCGTGGCCAAGTTTATGTCTTCAATTCCGTTACCCCTGAAAAGGTTGTTGTTGGAGATGCACAACGTGTGAGTGGTAGTAATTCATGGGCAACTAAGGATGGAAGAAAAGCTTGGCAACAAAAATCACATGACAACAAGAACCAGAATTCACCTCCTCCTCCTCCTCCGTCATCGTCATCATTGGATTCTCATGTCTCCAACACAGACGAGACGCAAACAGAGAAGCAGCAGCAGGAGGCACCCTTTGATATTTGCTCCCCTAAACAAGGTGGAGGCGTTGTTGTTTTCAAGGCTCCTTTGTTGGTAAAGAACAGAGAAAGAAGGAAAGAGATGAAACGCGGTGGTGGTGGTGAGAATAAAGGAGTTGTATTGAGGCCTGGGATGGTCCTTTTGAAGGCTCACATTCCGATAACCGATCAGGTGAATATAGTGAAGAGATGCAGGGAGTTGGGGATGGGTCATGGAGGGTTTTACCAGCCGGGTCATGGGGATGGCACTAAACTGCATTTGAAGATGATGTGCCTTGGCAAAAACTGGGATTGTCAGACAAAGCAATACGGAAGCCAACGCCCATCCGATGGGGCCCACCCACCCCCCATTCCTCCCGAGTTCCTTCACTTGATTCAGAAAGCAATAGATGACTCTCATGCGCTCATTCAACAACAACACTCTATAACCTCCGGTCCACGCAAAATCCTTCCCTCCTTCTCCCCCGACATTTGTACTGTGAATTTTTACTCACAGAACGGCAGACTAGGTCTTCATCAGGACAAAGGTGAAAGTAAAGAGAGTCTTTGTAAAGGCTTGCCTGTGGTTTCCTTTTCCATTGGAGACTCTGCTGAGTTTCTGTATGGTGACCACAGGGACGTCGACAAGGCACAGAAAGTTGTACTGGAATCGGGAGATGTTTTGATCTTTGGTGGCAAGTCTAGACATGTCTTTCATGGCGTAACCACAATTCATCCAATGACTGCCCCCAACCTCTTCCTGGAACAAACTAATCTACGCCCTGGCCGATTGAATCTTACTTTCAGACAGTATTAG 1194 0.4816 MYGTMNQIEDNDDGDHHIHYDSPALEDGGATDPDMSLQRCDDSSQLTLSFRGQVYVFNSVTPEKVVVGDAQRVSGSNSWATKDGRKAWQQKSHDNKNQNSPPPPPPSSSSLDSHVSNTDETQTEKQQQEAPFDICSPKQGGGVVVFKAPLLVKNRERRKEMKRGGGGENKGVVLRPGMVLLKAHIPITDQVNIVKRCRELGMGHGGFYQPGHGDGTKLHLKMMCLGKNWDCQTKQYGSQRPSDGAHPPPIPPEFLHLIQKAIDDSHALIQQQHSITSGPRKILPSFSPDICTVNFYSQNGRLGLHQDKGESKESLCKGLPVVSFSIGDSAEFLYGDHRDVDKAQKVVLESGDVLIFGGKSRHVFHGVTTIHPMTAPNLFLEQTNLRPGRLNLTFRQY* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00159 397 MobiDBLite consensus disorder prediction 73 136 - -
Rops9g00159 397 MobiDBLite consensus disorder prediction 9 23 - -
Rops9g00159 397 ProSiteProfiles Tify domain profile. 39 74 IPR010399 -
Rops9g00159 397 MobiDBLite consensus disorder prediction 110 133 - -
Rops9g00159 397 MobiDBLite consensus disorder prediction 1 36 - -
Rops9g00159 397 Pfam 2OG-Fe(II) oxygenase superfamily 177 395 IPR027450 -
Rops9g00159 397 Gene3D - 172 397 IPR037151 -
Rops9g00159 397 FunFam 2-oxoglutarate-dependent dioxygenase family protein 172 397 - -
Rops9g00159 397 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 287 397 IPR005123 -
Rops9g00159 397 Pfam tify domain 43 65 IPR010399 -
Rops9g00159 397 SUPERFAMILY Clavaminate synthase-like 174 397 - -
Rops9g00159 397 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 81 397 IPR004574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00159 Rops-Chr9 1969932 1972542 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Rops9g00159 2OG-FeII_Oxy_2 1.3e-38 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00159 - - pcin:129288582 359.762