Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g00158 | ATGATATCAGTTGAGGCACTAGTCATATTTTCCAGGGCATGTGAAATGTTCATATTAGAGTTAACCCTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGAGAACACTTCAGAAAAATGATATTGCAGCAGCAATCACAAGGACTGATTTTTTTGATTTCTTGGTTGACATCGTGCCTCGGGAGGATTTGAAAGATGGAGTGCTTGCATCCATCCCAAGAGGGACAATGCCTGTTGCAGGGCCTGCTGGTGTCATAATGGTTCCTTTTGTATCTGATATTGCCTACATTTCCTCGCTTGCAGATTACCGGGCACTGCAATCAGACGAGGATGTCAAAGCTGAATGGTGGGGAAGGAGGGAGCCCGGTGGAAGTGCTGCTTCGTTGCTAGAAGGCTCTGTTTATTGTTTAATAGTGTTCTATAACATTCCAGCAACTGAGAGACAAGAATGGGCCAAAGGGGATGGTATGAAAGACATCAATGAACTGAGAGAAGTCTTCTGGAATGAAACAAGATCATGGTTTTTGATATACTTGGAGAAGACATTAGATGCTGGGTTTTCCGTGGGCTCCCAAGAGAAGGGTAAAGAGAGTAAGGATATTGCAGGAAAACAAACGGAGAAAGCCAACCATATAGCTCTCACATTGTCCCATCTTAAGCACGCGAATGAGTGGCTGGACTGGACAATCTGA | 693 | 0.4416 | MISVEALVIFSRACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDFFDFLVDIVPREDLKDGVLASIPRGTMPVAGPAGVIMVPFVSDIAYISSLADYRALQSDEDVKAEWWGRREPGGSAASLLEGSVYCLIVFYNIPATERQEWAKGDGMKDINELREVFWNETRSWFLIYLEKTLDAGFSVGSQEKGKESKDIAGKQTEKANHIALTLSHLKHANEWLDWTI* | 231 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g00158 | 230 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 1 | 96 | - | - | |
Rops9g00158 | 230 | Pfam | Plant protein of unknown function (DUF936) | 146 | 227 | IPR010341 | - | |
Rops9g00158 | 230 | SUPERFAMILY | Histone-fold | 1 | 61 | IPR009072 | GO:0046982 | |
Rops9g00158 | 230 | Gene3D | Histone, subunit A | 1 | 61 | IPR009072 | GO:0046982 | |
Rops9g00158 | 230 | Pfam | Core histone H2A/H2B/H3/H4 | 1 | 46 | IPR007125 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g00158 | Rops-Chr9 | 1967305 | 1969455 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g00158 | 1 | 84 | CCAAT-HAP5 Transcription Factor Family | AT1G08970 | 84.524 | 7.48e-46 | 150 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YC | Rops9g00158 | DUF936 | 1.8e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g00158 | K08066 | - | gmx:100527803 | 155.992 |