Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00158 ATGATATCAGTTGAGGCACTAGTCATATTTTCCAGGGCATGTGAAATGTTCATATTAGAGTTAACCCTGCGTTCTTGGAATCACACTGAAGAGAACAAAAGGAGAACACTTCAGAAAAATGATATTGCAGCAGCAATCACAAGGACTGATTTTTTTGATTTCTTGGTTGACATCGTGCCTCGGGAGGATTTGAAAGATGGAGTGCTTGCATCCATCCCAAGAGGGACAATGCCTGTTGCAGGGCCTGCTGGTGTCATAATGGTTCCTTTTGTATCTGATATTGCCTACATTTCCTCGCTTGCAGATTACCGGGCACTGCAATCAGACGAGGATGTCAAAGCTGAATGGTGGGGAAGGAGGGAGCCCGGTGGAAGTGCTGCTTCGTTGCTAGAAGGCTCTGTTTATTGTTTAATAGTGTTCTATAACATTCCAGCAACTGAGAGACAAGAATGGGCCAAAGGGGATGGTATGAAAGACATCAATGAACTGAGAGAAGTCTTCTGGAATGAAACAAGATCATGGTTTTTGATATACTTGGAGAAGACATTAGATGCTGGGTTTTCCGTGGGCTCCCAAGAGAAGGGTAAAGAGAGTAAGGATATTGCAGGAAAACAAACGGAGAAAGCCAACCATATAGCTCTCACATTGTCCCATCTTAAGCACGCGAATGAGTGGCTGGACTGGACAATCTGA 693 0.4416 MISVEALVIFSRACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDFFDFLVDIVPREDLKDGVLASIPRGTMPVAGPAGVIMVPFVSDIAYISSLADYRALQSDEDVKAEWWGRREPGGSAASLLEGSVYCLIVFYNIPATERQEWAKGDGMKDINELREVFWNETRSWFLIYLEKTLDAGFSVGSQEKGKESKDIAGKQTEKANHIALTLSHLKHANEWLDWTI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00158 230 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 96 - -
Rops9g00158 230 Pfam Plant protein of unknown function (DUF936) 146 227 IPR010341 -
Rops9g00158 230 SUPERFAMILY Histone-fold 1 61 IPR009072 GO:0046982
Rops9g00158 230 Gene3D Histone, subunit A 1 61 IPR009072 GO:0046982
Rops9g00158 230 Pfam Core histone H2A/H2B/H3/H4 1 46 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00158 Rops-Chr9 1967305 1969455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00158 1 84 CCAAT-HAP5 Transcription Factor Family AT1G08970 84.524 7.48e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Rops9g00158 DUF936 1.8e-16 No_clan