Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00156 ATGGGTCCTATTCCAAAAAAGTGGCGTGGGATATGTCAAATTGACAATTTTCATAGCTCAGATAAAAAATATTGCAACAGGAAGCTGGTTGGAGCAAGATTTTTCAACAAGGGTTATGAGGCACAAGCTGGCAAACTCAATGCATCATTCTATACTGCACGTGACACACAAGACCATGGTTCTCATACTCTTTCAACTGCTGGGGCTGCTTTTGAGGCTGCCATAAGTGATGGTGTTGATGAGCTTTCAGTTTCTCTTGGTGCAATGGGTCCTGATAAACTGTTTGAGGATTCTGTTGCTATAGGTTCCTTCCATGCAATTGCCAATGGCATAGTGGTTGTTACCTCTGCAGGGAATAATGGACCAAATGGGTCTATTCCTAATGTGGCACCCTGGTTATTCACGGTTGCTGCTAGCACAATAGATAGGGACTTCACAAGTTATGTTGTGCTGGGAGACAAGAAGCAACTTAAGGGAGCCAGTCTTTCATCTGTGGTCTTGCAATCACAGAAATTATATCCTTTGATTAGTGCTTTGGATGCCGAATATGCCGGTGTATCATCTGGAGCTGTCAGATATTGCGATGAAGGATCACTTGATGCTAAAAAGGTGAAGGGAAAAATAGTGGTCTGCCAAAATTTGTTTAATGGATTTTTTGAAGGCCCAGCAGCTTCTTCAGCTGGCGCAGTAGGAATGATTTTGGTCAATGATGACACAAGAAGCCCCTATGATTCTATGGCATTCCCTCATGCTTTACCTGCTTCACATGTCACTAGCACTGATGGTGAATATCTTTATTCCTACATCAAACGTAAAAAGAACCCTGTGGCTTACATAACTAGACCAAAAACAGAAATTCCAATAGTTCCAGCTCCAGTGATTGCTTCATTCTCATCCAGGGGACCTAACATCGTTGTGCCATCAATTCTAAAGCCTGACATCACTGCACCTGGAGTGAACATAATTGCTGCTTACTCAGGAGCCACAAGTGTATCTGGACAAAAATCAGATACTAGAAAGGTTCCTTTCAATTCAAAGTCCGGAACTTCCATGTCATGCCCCCATGTCGCTGGCATTGTGGGCCTTCTCAAAACACTTCATCCTGAATGGAGTCCAGCAGCTATCAAATCAGCAATTATGAGCAAGCACAATGGATAA 1158 0.4292 MGPIPKKWRGICQIDNFHSSDKKYCNRKLVGARFFNKGYEAQAGKLNASFYTARDTQDHGSHTLSTAGAAFEAAISDGVDELSVSLGAMGPDKLFEDSVAIGSFHAIANGIVVVTSAGNNGPNGSIPNVAPWLFTVAASTIDRDFTSYVVLGDKKQLKGASLSSVVLQSQKLYPLISALDAEYAGVSSGAVRYCDEGSLDAKKVKGKIVVCQNLFNGFFEGPAASSAGAVGMILVNDDTRSPYDSMAFPHALPASHVTSTDGEYLYSYIKRKKNPVAYITRPKTEIPIVPAPVIASFSSRGPNIVVPSILKPDITAPGVNIIAAYSGATSVSGQKSDTRKVPFNSKSGTSMSCPHVAGIVGLLKTLHPEWSPAAIKSAIMSKHNG* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00156 385 SUPERFAMILY Subtilisin-like 16 381 IPR036852 GO:0004252|GO:0006508
Rops9g00156 385 Pfam Subtilase family 53 382 IPR000209 GO:0006508|GO:0008236
Rops9g00156 385 ProSiteProfiles Serine proteases, subtilase domain profile. 1 385 - -
Rops9g00156 385 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 68 IPR045051 -
Rops9g00156 385 PRINTS Subtilisin serine protease family (S8) signature 55 68 IPR015500 -
Rops9g00156 385 PRINTS Subtilisin serine protease family (S8) signature 347 363 IPR015500 -
Rops9g00156 385 Gene3D Peptidase S8/S53 domain 69 381 IPR036852 GO:0004252|GO:0006508
Rops9g00156 385 Gene3D Peptidase S8/S53 domain 1 68 IPR036852 GO:0004252|GO:0006508
Rops9g00156 385 CDD PA_subtilisin_like 148 279 - -
Rops9g00156 385 FunFam subtilisin-like protease SBT1.5 142 286 - -
Rops9g00156 385 ProSitePatterns Serine proteases, subtilase family, serine active site. 348 358 IPR023828 -
Rops9g00156 385 Gene3D - 142 286 - -
Rops9g00156 385 Pfam PA domain 193 265 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00156 Rops-Chr9 1925805 1927808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00156 1 381 Subtilisin-like Serine Gene Family AT2G04160 48.499 9.49e-124 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00156 - - pcin:129318364 425.246