Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00155 ATGAGAGGAACCCTAAATCTCATGCTCTCCACCGGTGCCTGCGGTGCACTCCGGCTATCCTCCGACGGTCAATCCCTCTCCGGAAGGTGTATCCGGCATCCGATTGCGGGTTCCGTCAACCGGTGCAGGGTTTCGATTCGTGCTTTCATTGCGACGGCAACGGCGGTCGATTCACGGCGTCCGGCGAGTCTCTACGAGGTGCTACGGATAAAGCAGAACGCGTCGGCGATGGAAATTAAGTCGGCATATCGGAACCTTGCGAAGGCGTACCATCCTGATTCTGCGATTCGGAAATCGGAATTTGACGAAAGGGACTTCATTGAAATCCACGATGCTTACGAGACGCTGTCGGATCCTTCGGCGAGAGCGCTCTATGATATGTCGTTGATGGCCGCGCACGGTGGAAGAGGCTCGTTCTCATTTTCCGGGACTCCGAATGGCTCTTCCGGATTCTACTCGACCCGGAGGTGGGAAACGGACCAATGCTGGTAG 492 0.561 MRGTLNLMLSTGACGALRLSSDGQSLSGRCIRHPIAGSVNRCRVSIRAFIATATAVDSRRPASLYEVLRIKQNASAMEIKSAYRNLAKAYHPDSAIRKSEFDERDFIEIHDAYETLSDPSARALYDMSLMAAHGGRGSFSFSGTPNGSSGFYSTRRWETDQCW* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00155 163 PRINTS DnaJ domain signature 101 121 IPR001623 -
Rops9g00155 163 PRINTS DnaJ domain signature 65 83 IPR001623 -
Rops9g00155 163 PRINTS DnaJ domain signature 83 98 IPR001623 -
Rops9g00155 163 Pfam DnaJ domain 64 126 IPR001623 -
Rops9g00155 163 SUPERFAMILY Chaperone J-domain 63 151 IPR036869 -
Rops9g00155 163 CDD DnaJ 65 118 IPR001623 -
Rops9g00155 163 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 38 163 - -
Rops9g00155 163 SMART dnaj_3 62 121 IPR001623 -
Rops9g00155 163 ProSitePatterns Nt-dnaJ domain signature. 106 125 IPR018253 -
Rops9g00155 163 ProSiteProfiles dnaJ domain profile. 63 129 IPR001623 -
Rops9g00155 163 Gene3D DnaJ domain 51 138 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00155 Rops-Chr9 1917191 1917682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00155 65 126 C2H2 Transcription Factor Family AT1G74250 45.455 1.18e-09 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g00155 9 1917191 1917682 Rops9g00155 9 1917191 1917682 ECH
Rops11g02517 11 42920298 42920744 Rops9g00155 9 1917191 1917682 PCT