Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00145 ATGAGTTCTAGATTGATTGGAAGGTATATCTCGAATGGTGGCCGGGCCACCACAATTGAAGTTTACATTGCTTCTAAGGTTAAACATAATGGTGAACTAGATTATTACTCGATTCTTGGATTAAAGCCTTCTGCAGATAAAGAGTCTATCAAGAGACAGTGCAAGAAGATGACAGTTTTGCTTCATTCAGATAAGAACAAATGTGTGGGAGCTGATGGGGCATTCAAGCTTGTTTCTGAGGCATGGATTTGGCTATCAGATAGTGCTATGCATGTATCATTCTCTTGTAATGAACCACAAGAAGTCAAGCCAAGTAGACTTGACAAGAATCGGAAAGTTGTGGTGGGAGCCAGTTTCAGAAATGGCTATGAAGACAAGGTGTCAAAATGTGCTTCAGAAGCAATAGTGTCTAATGGAAATGATTGCAATGGACATGGACAGAAGCTTTCCTGCACTAATGAAGTTCAGACAAAACAGTGTTCCATGCCACCAGCATTTGACGCGAGAAAATTACTGACTGAGGAAGCCAGGACAGAAATTAGGAAGAAACTGGAAGAGATGAAGTTGTCATATGCAGCTGCAGCAGCTGAAACTCTGAATGAGAGAGAAAAAGCACAAGTTGAAGCTTTACCAAATCTTGTGGAAATTTCAGGGCTTGGAATTCTGATGTTGTCGACCAATGTTCTAAGCCAGGAGAAGCCTGGCCGAGGTGGTTGCGTTCGCATATATCCTAGAAGTGGAGATATTTGGGCTGTTTATCGAAATTGGTTACCAGATTGGAACAGATCCACTCTGGACAAGGTGAGGCATCTGTATGAAATGGTGGAGGGTGCTGGATGA 840 0.4238 MSSRLIGRYISNGGRATTIEVYIASKVKHNGELDYYSILGLKPSADKESIKRQCKKMTVLLHSDKNKCVGADGAFKLVSEAWIWLSDSAMHVSFSCNEPQEVKPSRLDKNRKVVVGASFRNGYEDKVSKCASEAIVSNGNDCNGHGQKLSCTNEVQTKQCSMPPAFDARKLLTEEARTEIRKKLEEMKLSYAAAAAETLNEREKAQVEALPNLVEISGLGILMLSTNVLSQEKPGRGGCVRIYPRSGDIWAVYRNWLPDWNRSTLDKVRHLYEMVEGAG* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00145 279 Pfam DnaJ domain 34 89 IPR001623 -
Rops9g00145 279 Pfam Domain of unknown function (DUF3444) 223 276 IPR024593 -
Rops9g00145 279 ProSiteProfiles dnaJ domain profile. 34 90 IPR001623 -
Rops9g00145 279 SUPERFAMILY Chaperone J-domain 27 89 IPR036869 -
Rops9g00145 279 PRINTS DnaJ domain signature 54 69 IPR001623 -
Rops9g00145 279 PRINTS DnaJ domain signature 70 90 IPR001623 -
Rops9g00145 279 PRINTS DnaJ domain signature 36 54 IPR001623 -
Rops9g00145 279 SMART dnaj_3 33 90 IPR001623 -
Rops9g00145 279 CDD DnaJ 34 87 IPR001623 -
Rops9g00145 279 Gene3D DnaJ domain 18 92 IPR036869 -
Rops9g00145 279 PANTHER BNAC03G44070D PROTEIN 231 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00145 Rops-Chr9 1821421 1825952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00145 34 94 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.923 2.96e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00145 - - gmx:100792639 177.563