Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00132 ATGGAAGCAAACAAAGAGGAAGCACTTAAAGCAATTGAGATTGCTGAGAAGCGATTTGCTCAGAGAGATTTCACAGGCGCAAAAAACTATGCTGTAAAGGCGAAAACGCTTTGTCCAGGATTGGAGGGTATATCTCAAATGGTGGCCACATTTGAAGTTTACATTGCTTCTGAGGTCACACATAATGGTGAACTAAATTATTATTCGATTCTTGGATTAAAACCTTCTGCAAATAAAGAGGCTGTCAAGAGACAGTACAAGAAGATGGCAGTCTTGCTTCATCCAGATAAGAACAAATGTGTGGGAGCTGATGGGGCATTTAAGCTTGTTTCTGAGGCATGGACTTGGCTATCAGATAGTGCTATGCGTAGTTCTTATGATCTCAAGAGAAATGCACAGTTGGGCAGGGTCGATCAAAGGAATTTGTCTTCTGTCCAGGCTCCAGGGGCTGCAGGTCATAACAAACGTTCCAATTTGTCAACCACTCACAGTGGGCTTGACACCTTTTGGACAATATGCACCTCTTGTAAGGTTCAGTATGAGTATCTACGCAAGTATGTGAATAAAAGGCTCTCTTGTAAGAACTGCCGTGGCACTTTCGTTGCTGTTGAAACTGGAGCAGCCCCAGCAAATGGTTCATTTCCTTATTGTCCTTGGCCGTATGTGCCAGGAAATGGGTATGGAAATCATTCATTTGAAGGAGTTACATATGTTCCAACTAGTGCCCCCTATTTCAATGGGAATGGGGTCACAGGATACCATTCTGGACATGGATATGAGTATGTTTCAAATGTTTCATTTCAGTGGGGCTCTGCTGGACTTGTCAGTCAAAATGGATCAACCACCATACCTGCTGATTCTGTTTATCAGGCCAATGGGAATGTGAAGAGGGGAAGACCAAAGGTCAAATCAGGAGCTGATGGAATGCATCACATGGCAGAGACTGTGGTCAATATAAATTCAGATGTATCGTTCTCCTGTAATGAACCGCAGGAAGTTAAGCCAAGTAGACCTGACAAGAAACGGAAAGTTGTGGTGGGAGCCATTTTGAGAAATGGCTACGAAGAAAAGGGGTCAAAATGTGTTTCAGAAACAATAGTTTCTAATGGAAATGATAGCATTGGACCTGGCCAGAAGCTTTCCTGCACAAATGAAGTTCAAACCAAACAGTGTTCTATGCCACCATCATTTGACGCAAGAAAATTATTGATTGAGAAAGCCAGGACAGAAATTAGGAAGAAACTGGAAGAGATTAGGCTGTCATCTGAAGCTGCAGCAGCTGCAACTTTGAATGAGAGAGAAAAAGCACAAGCTGAAGTTGGTCAAGTTAAAAGAGAGACATGTAGAAGAACAGTTCTGAATGTTTGTGGTCTTCAATTAGAGAAAACTGGTCCAATCTCAATAACTGTCCCAGATTCTGACTTTCATGAGTTTGATAAAGATAGGACAGAGGAATGCTTCAAGCCGAAGCAAATATGGGCCTTATACGATGAGGAAGATGGAATGCCAAGATTATATTGTCTGATCCGTGAGGTTGTATCTGTTAATCCATTTAAGATTCATATCAGTTACTTGAATTCCAAAACTGATAGTGAGTTTGGCTCAGTGAATTGGCTTGATTCAGGCTTTACCAAATCTTGTGGAAATTTCAGGGCTTGGAATTCTGATGTTGTTGACCAAGTGAACATATTTTCTCATGTTCTTAGCCAGGAGAAGGCTGGTAGAGGTGGTTGCGTTCGCATATATCCCAGAAGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCACCAGATTGGAACAGATCTACTCCAGACAAAGTGAGGCATCAGTATGAAATGGTGGAGGTGCTGGATGATTACTCTGAAGAACTTGGTGTCTGTGTTACTCCCCTTATTAAGATGGCTGGATTTAAAACAGTATACAAGAGGAATACAGACAAAAGTGCCATAAAATGGATACCAAGAAGAGAAATGGTACGCTTTTCACACCAAGTGCCTTCTTGGTTGCTGAAAGGGGAGGCAAGCAATTTGCCTGAACGGTGTTGGGACCTTGATCCGGCTGCAACTCCGGATGAGCTTCTTCATGCTGCTGCAGAAGAAAACACTTCATAG 2112 0.4228 MEANKEEALKAIEIAEKRFAQRDFTGAKNYAVKAKTLCPGLEGISQMVATFEVYIASEVTHNGELNYYSILGLKPSANKEAVKRQYKKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSAMRSSYDLKRNAQLGRVDQRNLSSVQAPGAAGHNKRSNLSTTHSGLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYCPWPYVPGNGYGNHSFEGVTYVPTSAPYFNGNGVTGYHSGHGYEYVSNVSFQWGSAGLVSQNGSTTIPADSVYQANGNVKRGRPKVKSGADGMHHMAETVVNINSDVSFSCNEPQEVKPSRPDKKRKVVVGAILRNGYEEKGSKCVSETIVSNGNDSIGPGQKLSCTNEVQTKQCSMPPSFDARKLLIEKARTEIRKKLEEIRLSSEAAAAATLNEREKAQAEVGQVKRETCRRTVLNVCGLQLEKTGPISITVPDSDFHEFDKDRTEECFKPKQIWALYDEEDGMPRLYCLIREVVSVNPFKIHISYLNSKTDSEFGSVNWLDSGFTKSCGNFRAWNSDVVDQVNIFSHVLSQEKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDKVRHQYEMVEVLDDYSEELGVCVTPLIKMAGFKTVYKRNTDKSAIKWIPRREMVRFSHQVPSWLLKGEASNLPERCWDLDPAATPDELLHAAAEENTS* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00132 703 PANTHER BNAC03G44070D PROTEIN 1 690 - -
Rops9g00132 703 Gene3D DnaJ domain 55 150 IPR036869 -
Rops9g00132 703 SMART dnaj_3 65 122 IPR001623 -
Rops9g00132 703 Pfam DnaJ domain 66 127 IPR001623 -
Rops9g00132 703 Pfam Domain of unknown function (DUF3444) 467 673 IPR024593 -
Rops9g00132 703 SUPERFAMILY Chaperone J-domain 59 131 IPR036869 -
Rops9g00132 703 CDD DnaJ 66 119 IPR001623 -
Rops9g00132 703 Coils Coil 404 424 - -
Rops9g00132 703 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Rops9g00132 703 Coils Coil 426 446 - -
Rops9g00132 703 PRINTS DnaJ domain signature 86 101 IPR001623 -
Rops9g00132 703 PRINTS DnaJ domain signature 68 86 IPR001623 -
Rops9g00132 703 PRINTS DnaJ domain signature 102 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00132 Rops-Chr9 1634578 1639070 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00132 4 301 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.556 4.68e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00132 - - gmx:100788692 1246.49