Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00108 ATGTCCCAAGCAAGCACGTCCTCAGCTGGTGGTGATGGTGCCAACATTGAACTTGGTGCTACTAGCTTGCTCCTCACTAGCAAGTACACCAGGATATGGCGGAGAAGGGTCATCTCTTTGAAGAAGAGAACAACCGTCAGTGGCAGCTTTGGATCCCCACCATCATCACCTGCTAGGACCTCCTCTTCCAAATCTTCTTTTGCAATTGATATAGAAGAGGAAGAAGAAGAACAGCGTATTAGGAATGATATTGCTAGAATTGTGAAGGAGCAGGACTTGAACTCACTTCTTGAGCTTGGTGGGGTTGACCGCATTTGTACTGTTCTCACTGGTCAACGTCAACACTCAGAGTGCACCCATGTACCAGTTCATGGAACGAGCTTCTCCAGCTTTTTATTGAAGAGTTGCAAACACAATCGTTACACAATTCCAACGCTGTTGATCTTAGCTGGATTGTATTTCGCCATAGAGTTCAAGCAGGAGGGACCCAGATATGGTTGGCATGATGGTGTTGCCATGGTTGTTGCTGTTCTCCTGCTGCTTGCATTCCCTTCAATAAGAAACTTTTGGCGTAAAAGACAAATGATGAAATTGGCAAAGAGAAAGGGCAAGTTTGTGGTGGGTGACACGGTGCGTCTGAAGCTCGGTGATGAGGTTCCAGCAGATGGTTTGTTTGTAAGTGGTGACATCTTTGTGATGGATGGGGCAATTAAAAGCAAAAGAAATCGTGAGATGAAACCGTTTCTTATAGCTGGTTCCAAGGTGATTGCGGGTGATGGAAGGATGCTTGTAGCATCAGTTGGAAACAAAAATAATTTGGTTGAGATGCAGAGGATAGGCCTGTTGGAGAATCTAATTGAGAAGCCAATTTCTGACATTGACAAAGTTACTCTTTTTATCGCTATACTGGTTGCACTTGTGCTGTTCATTCGCATAATTTGTAAGAAGGATGTGGACAGTGGTGATCTTCCAGAAATTAAGGGGAAGATCTCAGTTGGCTTTTTGATGGAAGTCCTTGAGAGAATGTTTTTTAGACCACAAGGAAGGATTTCCATTTTAACAGGTCTTATTACAGTTGTTATATTGAGTGTGCAACATGGAGTGCCACTTGTGATTTCAATTTCTCTCAATTACCAGGCTAATGAGTTAGGGTCAGAACAAGATGCAGTTCTTAACCATCCATTAGCTTGTGCAACAATGGGGTTAGTAACTGTCATATGTATTGATGTGTCAGGTGGGATCATATCTAAGCCAATGGAGGTTAGCAGAATCTTGATGGGGGAGACAGATATCAGCAAGGTTGAGGGATCAGCTGTGCCTGACTTGCTTAAACAAGGAGTTGGTTTATCAGTTCATGCACCGGAATTTTCTCTTTCTCCCATATTCAATGCACCTGTTTCAGGAAAATTCGAAGTTCTTAAGAGCAGTAAACTGAATTCTGACAAAGAAGGCAATGGAGTTTTGGTGAGAAAATTTGGGGACAATAAACAAAATCTGCACTTGCACTGGAGTGGGGATGCCTCCACAATATTGGAAATGTGTTCCCGATATTATGATAGTGAAGGAGAATGGCATGCCATGGAAAATCAGAAGATCATATTTGGGCAGATGATCCAAGAGATGGAGGACAGAGGCCTGAAACCAATTGCATTTGCTCATAAACAAACAGAAGAGGAAGAACTTGAGCAAAATGAATTGTTCTTGTTAGGACTGATGGGTCTCAACTATACACGTCAAGAATCGATAAAATTAGCTGTGGACAATCTTAGAAATACCCAAATACAGATCAAATTGGTCTCAGAAGATGATATCATGACAGTGAATGACATAGGTTGTGAGCTGGGAATAGAAGTGTCTGAAGATGGCCGGCTTGAAGGAAAAGAATTTCAAGATTTGAATGCTGAAGCTAGATTAGCCAAAGTGGATGGAGCAATTGTGATGGGAAGTTTCCGTCCTGAAGACAAGCTTGTCATGGTACAGTGCTTGCGAGAAAAAGGTCACGTGGTTGCATTCATTGGAAGAAGATTGAGTGATATTTCAGTTCTAAAGGAAGCTGATGTGGGGATTGTTCATAATTCTCTGAGCAGAATAATGGATGGCGAGGGCTTTGATATATCTATCAAAAGTTTATGTGCATTGAAACCAATTGTGAGGGCTGGCAGAAGTAAATATCACAATGTTCAGAAGTTCATTCAACTTCAGCTGACAGGTAACATATCAGGATCACTCATAACCTTGATTACAACAATATCCATTGGAAAATCTCCCCTAGCAGCAATCCAATTGATTTGGGTGAATATGCTAATGTGCTTTCTGGGCGGCCTAATGATGGTAATGGAGTTAAGCAGCGAGGAACAGCTTGCCAAGAAAGTTAGGAAAACCATGAATCAGCCAATTGTAACCAAAGAAATCAGGAAGAACATAGTTATTCAGGTTTTGTGTCAGATTTTTGTATGCATGATACTTGAATTTGGGGGAGATGTGACTGACAGTGAAAAGAGAGTTAGGAAAACCATGATCTTCAACACGTTCCTATTATGCCAGCTCTTCAATATGTTGCACACCATGCATTTGTTGAGAAGGGATGATTTCAGGATTGTTGTTCCGAGCTACTGTTTCTTGGTGGCTTTAGGTGGTTGTTTTCTTGTGCAGGTGCTGGTGATTGAGTATGCAAAAGGCCTAGCAGATTGCATGAAGCTGAATGCCACACAATGGGCTATCTGTTTCCTGGTTGGTGCTCTTTCATGGGTATATGGATGGGCATTGAAGAATATTCCAGTTATTATCAGCACCAATTCTCAGCACCAAGTCTCCACCCAACCAACTTGGTTCTATCTTTCTTGGGGTTTTCCATTTCTGATGCTCTTTATATTCCCTATAGGACTAATGTTTAACCAAATAGGCATGACATTTCGTTAG 2919 0.418 MSQASTSSAGGDGANIELGATSLLLTSKYTRIWRRRVISLKKRTTVSGSFGSPPSSPARTSSSKSSFAIDIEEEEEEQRIRNDIARIVKEQDLNSLLELGGVDRICTVLTGQRQHSECTHVPVHGTSFSSFLLKSCKHNRYTIPTLLILAGLYFAIEFKQEGPRYGWHDGVAMVVAVLLLLAFPSIRNFWRKRQMMKLAKRKGKFVVGDTVRLKLGDEVPADGLFVSGDIFVMDGAIKSKRNREMKPFLIAGSKVIAGDGRMLVASVGNKNNLVEMQRIGLLENLIEKPISDIDKVTLFIAILVALVLFIRIICKKDVDSGDLPEIKGKISVGFLMEVLERMFFRPQGRISILTGLITVVILSVQHGVPLVISISLNYQANELGSEQDAVLNHPLACATMGLVTVICIDVSGGIISKPMEVSRILMGETDISKVEGSAVPDLLKQGVGLSVHAPEFSLSPIFNAPVSGKFEVLKSSKLNSDKEGNGVLVRKFGDNKQNLHLHWSGDASTILEMCSRYYDSEGEWHAMENQKIIFGQMIQEMEDRGLKPIAFAHKQTEEEELEQNELFLLGLMGLNYTRQESIKLAVDNLRNTQIQIKLVSEDDIMTVNDIGCELGIEVSEDGRLEGKEFQDLNAEARLAKVDGAIVMGSFRPEDKLVMVQCLREKGHVVAFIGRRLSDISVLKEADVGIVHNSLSRIMDGEGFDISIKSLCALKPIVRAGRSKYHNVQKFIQLQLTGNISGSLITLITTISIGKSPLAAIQLIWVNMLMCFLGGLMMVMELSSEEQLAKKVRKTMNQPIVTKEIRKNIVIQVLCQIFVCMILEFGGDVTDSEKRVRKTMIFNTFLLCQLFNMLHTMHLLRRDDFRIVVPSYCFLVALGGCFLVQVLVIEYAKGLADCMKLNATQWAICFLVGALSWVYGWALKNIPVIISTNSQHQVSTQPTWFYLSWGFPFLMLFIFPIGLMFNQIGMTFR* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00108 972 SUPERFAMILY Calcium ATPase, transduction domain A 204 274 IPR008250 -
Rops9g00108 972 Gene3D - 443 570 IPR023299 GO:0000166
Rops9g00108 972 Gene3D - 571 701 IPR023214 -
Rops9g00108 972 PANTHER CATION TRANSPORTING ATPASE 81 927 - -
Rops9g00108 972 Gene3D - 706 827 - -
Rops9g00108 972 Gene3D - 828 931 - -
Rops9g00108 972 MobiDBLite consensus disorder prediction 45 68 - -
Rops9g00108 972 SUPERFAMILY HAD-like 531 773 IPR036412 -
Rops9g00108 972 SUPERFAMILY Calcium ATPase, transmembrane domain M 140 928 IPR023298 -
Rops9g00108 972 Gene3D - 266 422 - -
Rops9g00108 972 MobiDBLite consensus disorder prediction 45 67 - -
Rops9g00108 972 Pfam Cation transporting ATPase, C-terminus 755 923 IPR006068 -
Rops9g00108 972 Gene3D - 191 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00108 Rops-Chr9 1311074 1314241 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00108 87 927 Primary Pumps ATPases AT3G22910 31.135 2.72e-115 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00108 K01537 - gmx:102661547 999.579