Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00097 ATGCAGGCATCAGAGCAACATAAAAGTTCAAGTATGTACTATCAACCACAAATGGAGGCCTACTGCATGCCGCAGTATCGAACTTTAAATCATCAGCTATACTACAATGATGGAGGTCATGGAACCCGTTTCTACACTCCAAGTGCTTCTGAACTATACTGCACATTGGAGTCATCCTCTGCAGCTGGCAGTTTCACTGTTTACAACTCCCCTTCAACTGTTAGTTTCTCACCTAATGGTAGTCCCATGTCGCAGCAAGATTCTCACTCATATCCACCTGACCAGTATCATTCCCCTGACAATAACTATGGCTCTCCGATGAGTGGATCCTGCATAACTGATGATAGAAGTAGCTTCAAGAACAAGCTGAGAGAGTTGGAAAGTGTAATGCTTGGTCCTGATTCTGATAATCTTGATAGTTATGACAGTGCCATTAGCAATGGAACCAACTTTGTTTCACTTGAGAATGACAATTGGAGACAAACAATGGTAGCAATTTCTAGTAAAAACCTTAAGCACATCCTTATCGTATGTGCTAAAGCAATTGCAGACAATGATTTGCTAATGGCACAATGGCTGATGGACGAATTACGGCAGATGGTGTCAGTTTCTGGTGAACCGATTCAAAGGCTGGGAGCATACATGTTGGAAGGACTTGTTGCACGATTGACTGCCTCTGGGAGTTCAATCTACAAATCATTGAGATGCAAAGAACCAGAAAGTTCTGAGCTTCTATCCTACATGCACATACTTTATGAGGTTTGCCCCTACTTCAAATTTGGATACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGACAGAGTTCATATAGTTGACTTCCAAATTGCTCAAGGAAGCCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGGCCTGGGGGGCCACCCCACATTCGGATTACAGGTATTGATGATTCAACTTCAGCTTATGCCCGTGGAGGTGGACTACATATTGTGGGAAAGAGGTTATCCAAGCTTGCTGAGCATTTTAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCTGGTTGTGATGTTCAACTACATAACCTTGGAGTTCGACCGGGGGAAGCTCTGGCTGTAAATTTTGCATTCATGCTACATCACATGCCTGATGAAAGTGTCAGCACTCAGAATCATAGGGATAGGCTGTTGAGGATGGTTAAGAGCCTATCACCAAAGGTGGTGACACTTGTTGAGCAAGAATCTAACACAAACACTGCTGCATTCTTTCCACGTTTCCTTGAAACTCTGGACTATTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCCAGAGAGCGTAAAGAGCGAATCAATGTTGAGCAGCATTGCTTGGCAAGGGACTTAGTTAACATCATAGCTTGTGAAGGGGTTGAAAGAGTGGAACGACATGAGCTGCTTGGGAAATGGAGGTCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCCTTGAGTTCATTGGTGAATGGTACCATAAAGAAATTGCTTGAGAACTACAGTGATAGATATAGACTTGAAGAGAGAAATGGAGCTCTATATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCATGGAAATGA 1626 0.4299 MQASEQHKSSSMYYQPQMEAYCMPQYRTLNHQLYYNDGGHGTRFYTPSASELYCTLESSSAAGSFTVYNSPSTVSFSPNGSPMSQQDSHSYPPDQYHSPDNNYGSPMSGSCITDDRSSFKNKLRELESVMLGPDSDNLDSYDSAISNGTNFVSLENDNWRQTMVAISSKNLKHILIVCAKAIADNDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLTASGSSIYKSLRCKEPESSELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIVDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGKRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPRERKERINVEQHCLARDLVNIIACEGVERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLEERNGALYLGWMNRDLVASCAWK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00097 541 MobiDBLite consensus disorder prediction 75 104 - -
Rops9g00097 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 535 IPR005202 -
Rops9g00097 541 ProSiteProfiles GRAS family profile. 162 541 IPR005202 -
Rops9g00097 541 Pfam GRAS domain family 171 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00097 Rops-Chr9 1181863 1185312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g00097 109 541 GRAS Transcription Factor Family AT5G48150 76.310 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops9g00097 GRAS 1e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00097 - - gmx:100808300 1012.68