Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g00048 ATGTTTAGGAACTGCCAGAGAGAGGCCGAAGAAGCCCCCCACTCTCAGATTCAAAATTTTCTCAGAATGGGAGTTGGCCGTGAAGTGTCAATCTCGCTCGATGGAGTGAGGGACAAGAACATTATGCAGCTCAAGAAGCTGAATATTGCTCTTTTCCCTGTTCGTTATAATGACAAATACTATGCCGATGCACTTGCTTCTGGCGAGTTCACTAAACTAGCTTACTACAGCGACATTTGTGTTGGTGCAATTGCATGCCGGCTTGAGAAGAAGGAAGGTGGTGGGCAAGTTCGAGTTTACATCATGACTTTAGGTGTTTTAGCACCTTACCGTGGACTTGGTATCGGAACAAGGCTGTTGAATCATGCTCTTGATCTTTGCTCCAAGCAAAACATTTCTGAGGTATACTTGCATGTGCAGACGAACAATGAAGATGCCATAAACTTTTACAAGAAATTTGGGTTTGAAATTACAGAAACAATCCAGAACTATTATACAAACATCACACCACCAGACTGCTATGTTCTCACGAGGCATACGGCTCCAAGCCCAACGAAGAAATAA 564 0.4344 MFRNCQREAEEAPHSQIQNFLRMGVGREVSISLDGVRDKNIMQLKKLNIALFPVRYNDKYYADALASGEFTKLAYYSDICVGAIACRLEKKEGGGQVRVYIMTLGVLAPYRGLGIGTRLLNHALDLCSKQNISEVYLHVQTNNEDAINFYKKFGFEITETIQNYYTNITPPDCYVLTRHTAPSPTKK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g00048 187 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 31 182 IPR000182 GO:0016747
Rops9g00048 187 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 38 177 IPR016181 -
Rops9g00048 187 FunFam Putative n-alpha-acetyltransferase 50 28 181 - -
Rops9g00048 187 Pfam Acetyltransferase (GNAT) family 70 155 IPR000182 GO:0016747
Rops9g00048 187 CDD NAT_SF 73 138 - -
Rops9g00048 187 Gene3D - 27 180 - -
Rops9g00048 187 PANTHER N-ALPHA-ACETYLTRANSFERASE 27 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g00048 Rops-Chr9 681128 684110 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops9g00048 Acetyltransf_1 6e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g00048 K20793 - gmx:100499961 320.857