Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04372 ATGTTGGTTAGAGCAAATCAAATAGGTTCAAAGAACATACATGCTCTGGAAACTGACTGGCTCCCACAGAGTGTCTCCTTTATCCCTATCAGCTTCTCATATTCTCTCACTTATAAACTGATCGCTGCTATCCAACCACCATCAAATTTCTCTGTGAAGAAAATTCACATAAAAATGTCGACTTTCCCTGATACGGTGACAGATGGCCAGAGGTCCGGAAATTCCCAATTCACGCAGACTTGTAATCTCCTGAGTCAGTTCTTGAAGGAGAAGCGTGGTTTTGGAGCTCCAACGAGTGGCAAAGCAACTACCCTGGATTTGATAAGCAACCTGCAATATTCTGGTGACGCTTCGCGACAAAGTGCTTTTTGTCCCCGATTCGTGGAAAACCCCTGCATTAAGCAGTTTAACCTCAGATCAAACGCCCAATTGACAATATCTTATGCGGGGAAAGTGCTAGTGTTTGATGCTTTTCCGGCTGAGAAGGCGACGGAGGTCATGGAGTTAGCCACCAAGCTACCCTCTAATTCTGGCGATGACAATAATAACCCCCCTAGTACTTCCGAGAATTTGAACACAAAAACTGCCCAAGAGGCCCCTCAACCACGACCCCTTTCTTTTGGTTCAGATATGAGATACCCAAGGAGAGCTTCCCTTCTAAAATTCCTTCAGAAGAGGAAAGAAAGGGTCATTGCCAGAGGACCTTACCAAATGAACAATAACAAGCACGATAGAAAGAGTTCCGGAGCTGACCCTAAACCCGAAGATCATTCTTCCAAACACTTTGACCTTAACTTTTAG 801 0.4469 MLVRANQIGSKNIHALETDWLPQSVSFIPISFSYSLTYKLIAAIQPPSNFSVKKIHIKMSTFPDTVTDGQRSGNSQFTQTCNLLSQFLKEKRGFGAPTSGKATTLDLISNLQYSGDASRQSAFCPRFVENPCIKQFNLRSNAQLTISYAGKVLVFDAFPAEKATEVMELATKLPSNSGDDNNNPPSTSENLNTKTAQEAPQPRPLSFGSDMRYPRRASLLKFLQKRKERVIARGPYQMNNNKHDRKSSGADPKPEDHSSKHFDLNF* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04372 266 MobiDBLite consensus disorder prediction 172 202 - -
Rops8g04372 266 ProSiteProfiles Tify domain profile. 137 172 IPR010399 -
Rops8g04372 266 Pfam Jas motif 215 237 IPR018467 -
Rops8g04372 266 MobiDBLite consensus disorder prediction 230 266 - -
Rops8g04372 266 SMART tify_2 137 172 IPR010399 -
Rops8g04372 266 Pfam tify domain 141 170 IPR010399 -
Rops8g04372 266 MobiDBLite consensus disorder prediction 172 210 - -
Rops8g04372 266 MobiDBLite consensus disorder prediction 244 266 - -
Rops8g04372 266 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 69 247 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04372 Rops-Chr8 86926832 86928433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04372 77 238 Tify Gene Family AT1G19180 33.014 2.10e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Rops8g04372 tify 9.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04372 K13464 - gmx:100778559 211.46