Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04371 ATGTCAGGAGAAGCAGATCGGATGAGCACAGAGGAGGAGAAGATGGATACGGAAAAGGAGAAGAACCAGAAGCTGAAAGGGCGAAAGGTATCATGGGCCAATCTCCGCCGCGTCGACTCTCTCAATTTGGAAGCTGGAAGAGTTTCTATGACTGCAAACCACCCCTCCCAGATGGGTTGGAGAACCACATTGACCTTGGCATTTCAAAGCATAGGGATTGTATATGGTGATATTGGTACATCTCCACTCTATGTGTATGCCAGTACTTTCACCGATAAAATAAAAGACAACGATGACATTCTTGGTGTCTTGTCTCTCATCATCTATACCATCCTGCTCATACCCATGCTCAAATATGCGTTCATCGTATTATGGGCTAACGACAATGGCAACGGTGGAGCTTTTGCACTGTATTCGTTGATATGTAGGCATATAAAGATGAGTTTGATACCAAATCAACAACCAGAGGACAAGGAGCTTTCTAACTACAAACTCGAAACACCATCTAGCCAGCTGAAACGAGCCCAGAAAGTAAAGCAGATGCTTGAGAGAAGTCATTTTTCCCGGATTCTGCTTATACTTTTTGCTATCATGGGAACTTCTATGGTCATAGGAGATGGCATTCTTACTCCATCCATTTCAGTCCTTTCTGCAGTGAGCGGGATCAGTACATCACTAGGTAAAAATGCTGTAGTGGGCATCACTATAGCGATCTTGGTCGTCCTATTTTCTGTGCAAAGATTCGGTACTGATAAAGTGGGAGCCTCATTCGCTCCAGTTGTTATAGTGTGGTTTACATTCATTGGTGGCATTGGTCTCTACAATTTATTCAAATATGAAATTGGAGTATTACGCGCTTTTAATCCAAAATATATATTTGATTACTTCAAACGGAACGGTAAGCAAGGATGGACATCTCTTGGTGGAGTCTTTCTATGTATAACAGGATCTGAGGCCATGTTTGCTGACTTGGGTCACTTCAATGTACGAGCAATTCAAATTAGCTTTTCCTGCATTACATGTCCTGCATTATTGGCTGCATATAGTGGGCAAGCAGCATATCTACGAAAGTTCCCTGAGAATGTGGCTAATACTTTCTATGACAGTATACCGCATCGCTTATATTGGCCAACATTTGTTGTGGCTGTTGCTGCTGCCATTGTAGCCAGCCAGGCAATGATTTCAGGAGCATTTTCCATTATATCTCAGGCCCTGAGTCTAGGTTGTTTCCCAAAAGTTAAGGTGGTGCATACTTCCACTAAGCACCAGGGTCAGGTGTATATTCCTGAGGTCAACTACATGTTCATGTTTGCATGTATTGTGGTCTCTGCTGCCTTCAAGACCACAGAAAAGATTAGCCATGCATATGGGATTGCGGTTGTTGGTGATATGATGATCACAACATCCCTGGTTTCGCTTATCATGCTTGTTATATGGAAGAAGAACCTGTTGCTGGTGGTTCTCTTCTTTTTGGCATTCGGTGGCATTGAGGGTCTTTATTTCTCATCCCAACTAACCAAGTTCACAGGAGGAGGCTATCTCCCAATTGTATTAGCCATCTTCTTGACGACAATGATGGGAATCTGGCATTATGTGCACAAAGAAAGATACAAGTTTGAACTGGAAAACAAGGTTTCTAGTGGGTATTTGAGGGAATTGGCCAACAACACAGAGGTGCGCCGAGTGCCTGGCATCGGACTTCTGTATTCTGAGCTTGTACAAGGCATTCCTCCGATATTCCCACACTTTATAGCCAGCGTACCATCTATCCATTCAGTTGTTGTGTTTGTTTCCATCAAGACAATTCCAGTTAGTAGGGTTGCATCAGAAGAGAGGTTTCTGTTTCGGCAGGTGGAACCGAGAGAGTGTAGGATTTTTCGTTGTGTTGTGAGGCAAGGTTACAATGATATGCTTGAGGATCCCGTGGAATTTGAGTCACAGTTAATACAAAATCTCAAGGCATTTATACAAGAAGAGAGCTTTATGCTTGAGGTTGAGGGTCAGGGAACAACAACAACCACTGAACAAGTACCTGTCTCGATCAATGAGAGTGAGATGGCAAACATCCCTCAAGATTCCAATAAAGAAGGAAAAGCAAGGTCTTCTTCAACCAGGATAATCCCAAATCCAGGTGTGTCTCGGGCCTCATCAGATTCCATTCAGTCATTGGGTGAGAGTGTGACCAAGTCATCCAATTTCTTTGCCCCGCCCATCCAGGGAGCTGAAGAGGAAATAAAATTCATAGAGAGAGCAATGGAGAAGGGTGTGGTGTATATGTTAGGGGAAACAGAGGTAGTAGCTCAGCGGAATTCCTCTATCCTGAATAAGATAGTCGTCAACTATGCTTATAACTTTTTGCGGAAGAACTTTAGACAAGGCGAGATGGCAATCCCACGTAAGAGACTTCTCAAGGTTGGAATGACATATGAAATATGA 2436 0.4327 MSGEADRMSTEEEKMDTEKEKNQKLKGRKVSWANLRRVDSLNLEAGRVSMTANHPSQMGWRTTLTLAFQSIGIVYGDIGTSPLYVYASTFTDKIKDNDDILGVLSLIIYTILLIPMLKYAFIVLWANDNGNGGAFALYSLICRHIKMSLIPNQQPEDKELSNYKLETPSSQLKRAQKVKQMLERSHFSRILLILFAIMGTSMVIGDGILTPSISVLSAVSGISTSLGKNAVVGITIAILVVLFSVQRFGTDKVGASFAPVVIVWFTFIGGIGLYNLFKYEIGVLRAFNPKYIFDYFKRNGKQGWTSLGGVFLCITGSEAMFADLGHFNVRAIQISFSCITCPALLAAYSGQAAYLRKFPENVANTFYDSIPHRLYWPTFVVAVAAAIVASQAMISGAFSIISQALSLGCFPKVKVVHTSTKHQGQVYIPEVNYMFMFACIVVSAAFKTTEKISHAYGIAVVGDMMITTSLVSLIMLVIWKKNLLLVVLFFLAFGGIEGLYFSSQLTKFTGGGYLPIVLAIFLTTMMGIWHYVHKERYKFELENKVSSGYLRELANNTEVRRVPGIGLLYSELVQGIPPIFPHFIASVPSIHSVVVFVSIKTIPVSRVASEERFLFRQVEPRECRIFRCVVRQGYNDMLEDPVEFESQLIQNLKAFIQEESFMLEVEGQGTTTTTEQVPVSINESEMANIPQDSNKEGKARSSSTRIIPNPGVSRASSDSIQSLGESVTKSSNFFAPPIQGAEEEIKFIERAMEKGVVYMLGETEVVAQRNSSILNKIVVNYAYNFLRKNFRQGEMAIPRKRLLKVGMTYEI* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04371 811 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 57 810 IPR003855 GO:0015079|GO:0016020|GO:0071805
Rops8g04371 811 NCBIfam potassium uptake protein 66 811 IPR003855 GO:0015079|GO:0016020|GO:0071805
Rops8g04371 811 MobiDBLite consensus disorder prediction 685 721 - -
Rops8g04371 811 Coils Coil 8 28 - -
Rops8g04371 811 Pfam K+ potassium transporter 67 636 IPR003855 GO:0015079|GO:0016020|GO:0071805
Rops8g04371 811 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04371 Rops-Chr8 86907858 86914844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04371 8 811 Inorganic Solute Cotransporters AT4G13420 58.911 0.0 978
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04371 K03549 - gmx:100814313 1237.63