Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04362 ATGTGGTGGAGATCAGCATCATTCATCCTGGACAGGCAGCAGCAGAACGAGGGGGCTTTGAGGCCTGATTCATCGCTGTCGTCCATCACTCCTCCTCCTCCAGTTACGGCGGCTACAACCGAATCATCAATGGGTGGTGCTGAGAACCCTAATATTTCGGCTTACTATCAGACGAGAGCGGCGCACCATGGTGTGGTCACCAGCGACTGGCTGGCTCAGGCTCACGCTGCGATTGGTCAGGACCCTCCACCCGAACCTCAACCCATCCTCGATCACGATAAGCCCTTCAGTGTCATTGACGAGTTCAACAACTGGCGGAAACAGCCCCATTTGGCTGAGGCCGTCGCCGCCATCCGCGCCCTGGCCGCCGTCATTAGGTCCAGCCAGGCCACCACCATGATGCAGCTCGAAATTGAGCTCAAGAACGCCTCCGATTCTCTCAAATCCTGGGATACAACCTCTATCTCTTTGACCGCAGGCTGTGATCTCTTTATGCGATATGTAACCAGGACTTCTGCTTTAGAATTTGAGGACTTCAATTCCGCTAAGTCTCGCCTAATTGAGCGTGCAGAGAAGATCGGGGAAATCTCCTACAAGGCTCGGAAAGTTATTGCAATGTTGAGTCAAGATTTTATATTTGATGGTTGTACCATTTTGGTTCATGGTTTCTCCAGAGTTGTCTTTGAAGTTCTAAAACTGGCAGCACAAAATAAGAAACTATTTCGGGTCTTCTGCACAGAGGGAAGACCTGACCGAACAGGATTACGGTTGTCCAATGAGCTGGCTAAGCTGGATGTACCTGTGAAACTTGTAATAGACTCTGCAGTTGCATATACTATGGATGAGGTGGACATGGTTTTTGTGGGTGCAGATGCAGTTGTTGAAAGTGGGGGCATAATTAACATGATGGGGACATACCAAATTGCACTGGTTGCGCACAGTATGAATAAACCGGTTTATGTAGCTGCTGAAAGCTACAAATTTGCTCGTCTTTACCCTCTAGATCAAAAGGATTTGGCCCCTGCCTTACGCCCTATTGATTTTGGTGTACCCATTCCATCCAAGGTTGAGGTTGAAAGGTCTGCGCGGGACTACACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGATGTTCTTACTCCATCTGTCGTTAGTGATGAGCTGATCCAGCTATACTTATAG 1188 0.4865 MWWRSASFILDRQQQNEGALRPDSSLSSITPPPPVTAATTESSMGGAENPNISAYYQTRAAHHGVVTSDWLAQAHAAIGQDPPPEPQPILDHDKPFSVIDEFNNWRKQPHLAEAVAAIRALAAVIRSSQATTMMQLEIELKNASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEFEDFNSAKSRLIERAEKIGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADAVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLDVLTPSVVSDELIQLYL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04362 395 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 62 395 - -
Rops8g04362 395 Pfam Initiation factor 2 subunit family 110 383 IPR000649 GO:0044237
Rops8g04362 395 FunFam Translation initiation factor eIF-2B subunit alpha 199 395 - -
Rops8g04362 395 Coils Coil 133 153 - -
Rops8g04362 395 FunFam Translation initiation factor eIF-2B subunit alpha 94 196 - -
Rops8g04362 395 MobiDBLite consensus disorder prediction 14 50 - -
Rops8g04362 395 Gene3D - 94 195 IPR042528 -
Rops8g04362 395 Gene3D - 198 395 IPR042529 -
Rops8g04362 395 SUPERFAMILY NagB/RpiA/CoA transferase-like 74 394 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04362 Rops-Chr8 86718790 86721025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04362 1 395 Eukaryotic Initiation Factors Gene Family AT1G53880 78.894 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04362 K03239 - gmx:100808764 644.425