Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04344 ATGGTTCGAAGGCTGCTGCTCTTCAGCACTTGCATTCTTCATTTGATGCTCAGTGGTGTCACCGCCACAGATCCAAATGATGTTGCTGCTGTAAAGGCTATGTTTCAAAGCATGAACTCACCATCCCAGCTAGGTTGGCCTGCTAATGGTGATGATCCGTGTGGACAGTCTTGGCAAGGCATTACTTGTTCAGGAGACCGCATTACAGAGATTAAGTTATCTAATCTTGGACTAACTGGAATGTTGGCTTACGGATTACAAGCCTTGGCATCTGTGACCAACCTAGACGTGAGTAACAACAATCTTGTTGGAACCATACCATACCAACTTCCTCCAAATGTGCAGCACTTAAATCTTGCTTATAATAACTTCACTGGGACAGTTCCTTACTCTATTTCTAACTTGACCGCTCTTACGGACCTGAATCTCGGTCACAATCAGCTCCAGCAAGGACTGAGTGTCGACTTTCAAAATCTTTCTACCCTCTCCACATTGGATCTCTCTTTCAATTCTCTGACAGGCGACCTCCCTCAGACTCTGAGCTCGCTTTCAGGCATAACCGCCATGTATCTGCAAAACAACCAGTTTACAGGCACTATTGATGTACTTGCTAATCTGTCTCTGAATAGTCTGAACGTGGAAAACAATCATTTTACAGGATGGATACCGGAACAGTTGAAAAATATAGACCTAAAGGCTGGTGGTAATGCATGGAGCTCTGGATCTGCACCCCCACCTCCTCCTGGGACACCTCCAGCACCTAAAAGCAACCGAAACCACAAATCTGGTGGTAGAAGTACCACCGGCCAAGATGCTGCCAGTGGCACAATTGATGAGGGCAAAAAATCTGGGATAGGAGGTGGTGGCATAGCTGGAATTGTGATCTCCGTCATTGTTGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCATCTTCAGATTTAGAAAAGCTGGGCAATCAGTCCTTTACCTCTCTTCCTTCAAATGAAATGCATGAAGTCAAGACCGTGCAAACTTCCTCTGTAATTGACTTGAAGACGTTGGATACTTCTGCCTCAATAAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTTGATGACAATGAATTCTCAAAGAAGCCCACTATTGTCAAGAAGACTGTAACAGCTCCTGAAGATGTGCAATCATATTCTATAGCTGATCTGCAGATTGCTACTGGCAGCTTCAGTGTGGATCATCTTGTTGGTGAGGGGTCTTTTGGACGTGTGTACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAATGATTTGTCAGAAGATTTTACAGAAATAGTGTCAAACATCTCCCATTTACATCATCCAAACGTGACAGAGCTTGTGGGCTATTGCTCCGAGTATGGACAGCACCTCTTAGTCTATGAGTTTCATAAGAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAACCATTGATCTGGAATTCCCGTGTCAAGATATCTTTGGGGACTGCACGAGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTACTTGATGCAGAGCTTAATCCTCATCTTTCAGACTCTGGATTGGCAAGCTATATTCCTAATGCAGATGAGATATTGAACCAAAATGTTGGATCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACCCTGAAAAGTGACGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTCAGCGGACGAAAACCATTTGATAGTTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCAGCACTGAAAGGGCTATATCCCGTCAAATCTCTATCTCGTTTTGCAGATGTTATTGCTCTTTGCGTTCAGCTGGAACCTGAATTCCGACCACCCATGTCAGAAGTGGTTCAAGCACTGGTACGGTTAGTGCAGCGAGCTAACATGAGCAGGCGAACAACATTTGGAAGTGATCATGGAGGATCTCAACGAGGGAGTGATGAGCCAACTCTACGAGACATTTGA 2148 0.4381 MVRRLLLFSTCILHLMLSGVTATDPNDVAAVKAMFQSMNSPSQLGWPANGDDPCGQSWQGITCSGDRITEIKLSNLGLTGMLAYGLQALASVTNLDVSNNNLVGTIPYQLPPNVQHLNLAYNNFTGTVPYSISNLTALTDLNLGHNQLQQGLSVDFQNLSTLSTLDLSFNSLTGDLPQTLSSLSGITAMYLQNNQFTGTIDVLANLSLNSLNVENNHFTGWIPEQLKNIDLKAGGNAWSSGSAPPPPPGTPPAPKSNRNHKSGGRSTTGQDAASGTIDEGKKSGIGGGGIAGIVISVIVVGAIVAFFLVKRKSKKSSSDLEKLGNQSFTSLPSNEMHEVKTVQTSSVIDLKTLDTSASINLKPPPIDRHKSFDDNEFSKKPTIVKKTVTAPEDVQSYSIADLQIATGSFSVDHLVGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDLSEDFTEIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKISLGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADEILNQNVGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQLEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSDHGGSQRGSDEPTLRDI* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04344 715 MobiDBLite consensus disorder prediction 233 281 - -
Rops8g04344 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 487 695 - -
Rops8g04344 715 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Rops8g04344 715 MobiDBLite consensus disorder prediction 693 715 - -
Rops8g04344 715 Pfam Leucine rich repeat 91 148 IPR001611 GO:0005515
Rops8g04344 715 ProSiteProfiles Protein kinase domain profile. 409 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04344 715 Gene3D Ribonuclease Inhibitor 24 267 IPR032675 -
Rops8g04344 715 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 373 486 - -
Rops8g04344 715 Pfam Protein tyrosine and serine/threonine kinase 412 681 IPR001245 GO:0004672|GO:0006468
Rops8g04344 715 MobiDBLite consensus disorder prediction 255 274 - -
Rops8g04344 715 Gene3D Phosphorylase Kinase; domain 1 371 486 - -
Rops8g04344 715 SUPERFAMILY Protein kinase-like (PK-like) 393 681 IPR011009 -
Rops8g04344 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 24 249 - -
Rops8g04344 715 Gene3D Transferase(Phosphotransferase) domain 1 488 700 - -
Rops8g04344 715 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Rops8g04344 715 PANTHER LEUCINE RICH REPEAT KINASE 2 66 687 - -
Rops8g04344 715 SUPERFAMILY L domain-like 23 228 - -
Rops8g04344 715 CDD STKc_IRAK 415 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04344 Rops-Chr8 86533064 86542115 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04344 7 714 Strubbelig Receptor Gene Family AT1G53730 65.922 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Rops8g04344 PK_Tyr_Ser-Thr 4.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04344 - - gmx:100807707 1129.39