Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04335 ATGGCTTCCGCTTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCGACACCAAGTTCCCAGAAGAATGGATCATCCTTGGGAACCCCAAAAGCTTCTTTTCTTAGTGGGAGGAAATTGAGGGTGAACAAGTACACTGCACCAGTTGGAGGACGATCCACCACTACGGTGTGTGTAGCAGCTGACCCTGACAGGCCTCTCTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTTGATGGCAGTCTCCCAGGAGACTTTGGTTTTGATCCTCTAGGTCTTGGATCTGATCCTGAGACCCTTAGATGGAATGTTCAGTCAGAGATTGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATTCCAGAATTCCTAACAAAGATTGGCATCTTAAACACCCCCTCATGGTACACAGCTGGAGAACAGGAATACTTCACGGACACCACTACCCTCTTCATAGTTGAGCTCATTTTCATTGGCTGGGCTGAGGGTAGAAGGTGGGCTGATATAATCAAGCCAGGTTGTGTCAACACTGATCCTATCTTTCCCAACAACAAGCTCACAGGGACTGATGTTGGTTACCCAGGTGGGCTTTGGTTTGACCCCCTTGGATGGGGAAGTGGTTCTCCTGAGAAGATCAAGGAATTGAGAACAAAGGAGATCAAGAATGGGAGATTGGCCATGTTGGCTGTGATTGGTGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCTGGTCATGCTACCATTTTTGCTGCTTTCACACCCAAGTGA 813 0.4969 MASACASSAIAAVAISTPSSQKNGSSLGTPKASFLSGRKLRVNKYTAPVGGRSTTTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVIGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04335 270 FunFam Chlorophyll a-b binding protein, chloroplastic 75 260 - -
Rops8g04335 270 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Rops8g04335 270 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Rops8g04335 270 SUPERFAMILY Chlorophyll a-b binding protein 60 268 - -
Rops8g04335 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 268 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04335 Rops-Chr8 86425301 86427000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04335 46 270 Chloroplast and Mitochondria Gene Families AT3G61470 88.938 3.69e-150 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04335 K08908 - gmx:100784089 525.013