Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04321 ATGGCCAACCTTCCCAATTCGAAGAAGTTCTTTGAGAGTGAAGAAGACAGCAAGAAACAAGCGCCAGAATTAGAAGATGAAGAAAACTTCTCTTATGCTATGCAACTGGCCAACTCTATGGTGCTTCCCATGGCACTGCAATCTGCCATTGAACTGGGCGTTTTTGACGTCTTGCTAAAAGCGGGTGGTGGAGATGCTGCTAAGCTCTCTGCTAAGGAGATAGCGTCCCAGCTGTCATGCAACAACCCAGAAGCACCCTCAATGTTAGATCGTGTTCTCGCTCTTCTTGCCTCTCACTCTCTCCTTAACTGTTCCGTAGTTCCAGATCAACAAAACATTGGATCCTTTCACAGACTCTACACCATCACTCCTGTTGCCAGATTCTTTGCTCGTGATTCTGACGGTGTTTCATTGGGCCCCATTATGGCATTGCTTCAAGATAAGATCTTCCTAGCTAGCTGGCCCCAATTGAAAGATGCAATTCGGGAAGGGGGTATTCCATTCAACAGGGTTTATGGCACACATGCCTTTGAGTATCCAAGCTTGGACCCAAGATTCAATCAAGTTTTTAATACTGCAATGATCAATCACACCACTCTAGTTATGAAGAAGGTTCTTGAATGCTACAAAGGTTTTGAGGACATAAAAAGGCTTGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAACTTGATCACTTCCAAATACCCTCATATCCATGGTATCAATTTCGACTTACCTCATGTCATAGAACACGCCCCTTCCTATGCTGGAGTGGAACACGTTGGCGGAGATATGTTCGAAAGTGTGCCTAAAGGAGATGCCATCTTTATGAAGTGGATACTTCATGATTGGAGTGATGAGCACTGCTTGAAGCTTTTGAAGAATTGCTATGATGCTATTCCTGAAGATGGAAAGATGATTGTTGTGGAAGCAGTTCTTCCTATAATACCTGAAAATAATGCTGCTTGGAAGTCTATCTCCCAAACAGATGTTCTGATGATGACTCAAAATCCAGGAGGTAAAGAGCGAACTGAACAAGAATTCATGGAATTAGCAACTGGTGCTGGATTTAGTGGCATTAGATATGAATGCTATGTCTATAACTTTTGGATTATGGAGTTCTTCAAGTAG 1134 0.4303 MANLPNSKKFFESEEDSKKQAPELEDEENFSYAMQLANSMVLPMALQSAIELGVFDVLLKAGGGDAAKLSAKEIASQLSCNNPEAPSMLDRVLALLASHSLLNCSVVPDQQNIGSFHRLYTITPVARFFARDSDGVSLGPIMALLQDKIFLASWPQLKDAIREGGIPFNRVYGTHAFEYPSLDPRFNQVFNTAMINHTTLVMKKVLECYKGFEDIKRLVDVGGGLGININLITSKYPHIHGINFDLPHVIEHAPSYAGVEHVGGDMFESVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAIPEDGKMIVVEAVLPIIPENNAAWKSISQTDVLMMTQNPGGKERTEQEFMELATGAGFSGIRYECYVYNFWIMEFFK* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04321 377 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 377 IPR016461 GO:0008168
Rops8g04321 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 375 IPR029063 -
Rops8g04321 377 MobiDBLite consensus disorder prediction 9 25 - -
Rops8g04321 377 Gene3D - 11 129 IPR036388 -
Rops8g04321 377 FunFam Caffeic acid 3-O-methyltransferase 12 129 - -
Rops8g04321 377 FunFam Caffeic acid O-methyltransferase 130 377 - -
Rops8g04321 377 PIRSF O-mtase 11 377 IPR016461 GO:0008168
Rops8g04321 377 Gene3D Vaccinia Virus protein VP39 130 377 IPR029063 -
Rops8g04321 377 Pfam O-methyltransferase domain 154 359 IPR001077 GO:0008171
Rops8g04321 377 SUPERFAMILY "Winged helix" DNA-binding domain 25 132 IPR036390 -
Rops8g04321 377 MobiDBLite consensus disorder prediction 1 25 - -
Rops8g04321 377 PANTHER O-METHYLTRANSFERASE 33 362 IPR016461 GO:0008168
Rops8g04321 377 Pfam Dimerisation domain 44 97 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04321 Rops-Chr8 86255901 86259338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04321 23 377 Monolignol Biosynthesis Gene Families AT5G54160 53.652 4.19e-144 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04321 K13066 - gmx:100803633 608.986