Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g04315 | ATGCAAGCTGAAGCACAAAGCCAAATGGAAGCTCAAAGCTCTGAGCATGCGCAAATTATTGAAATCAGTGGAGATGTTATTCCCGATGTAAGAAGGAACATTTGTGAGGAAGCACCATGTGGATTCTCGAATGCTGGATCCATCTCTAAGGATTCAGAAGAAAGATCAAGTTCCATGCGGAAGCTTATGATGGCAGTGGTTCTTTGTGTTATTTTCATGAGCATTGAAGTAGTTGGTGGCATTAAAGCTAATAGCCTTTCAATTTTGACAGATGCAGCCCATTTGCTTTCAGATGTTGCAGCATTTGCCATCTCTTTATTTTCATTATGGGCTGCTGGTTGGGAAGCCAATCCTCGCCAGTCATATGGATTTTTCAGAATAGAAATTCTTGGTGCTTTGGTTTCTATTCAGCTGATATGGTTGCTCGCTGGGATCCTGGTATATGAAGCCATTGAAAGAATGGTTGCTGGGACTCATCATGTGAATGGATTTTTAATGTTCGTAGTTGCTGCATTTGGTCTAGTGGTTAACATCATTATGGCTCTGTTATTGGGTCATGATCATGGCCATGGACACAATGATCATGGCCACACCCATGGATTTCCTGTGTCTACTCATCATCATCATCATCATCATGTAAAGCATCCAAAAGAATGCCACAACCATCATGCTCCTGAGGAGGAGGTAGCTATACCACTTCTTGGTGGATCAAAATCTAAAGGGAAGAAAAAGAGATGGAACGTAAACGTACAAGGGGCTTATCTGCATGTACTTGGAGACTCTATACAGAGTGTTGGAGTAATGATTGGGGGAGCAATCATATGGTATAATCCTGAGTGGCAATTAGTTGATTTAATTTGCACTTTAATCTTTTCAGTAATTGTTTTGGTGACAACTATCAATATGCTGCGGAACATATTGGAAGTCCTTATGGAGAGCACACCGCGTGAGATAGATGCAGCTAAGCTTGAAAGGGAGTTGCTGGAAATGGAAGAAGTGGTGGCTGTTCATGAGTTGCATATATGGGCCATTACAGTTGGGAAGGTTTTACTGGCTTGTCATGTTAAAATCAGACCACATGTGAATGCAGACATGGTGCTGGAAAAGGTTATAGACTACATCAGAAGGGTTTATAACATCAGCCATGTCACCATACAGATAGAACGCTAG | 1170 | 0.4162 | MQAEAQSQMEAQSSEHAQIIEISGDVIPDVRRNICEEAPCGFSNAGSISKDSEERSSSMRKLMMAVVLCVIFMSIEVVGGIKANSLSILTDAAHLLSDVAAFAISLFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIERMVAGTHHVNGFLMFVVAAFGLVVNIIMALLLGHDHGHGHNDHGHTHGFPVSTHHHHHHHVKHPKECHNHHAPEEEVAIPLLGGSKSKGKKKRWNVNVQGAYLHVLGDSIQSVGVMIGGAIIWYNPEWQLVDLICTLIFSVIVLVTTINMLRNILEVLMESTPREIDAAKLERELLEMEEVVAVHELHIWAITVGKVLLACHVKIRPHVNADMVLEKVIDYIRRVYNISHVTIQIER* | 390 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g04315 | 389 | Gene3D | Cation efflux protein transmembrane domain | 58 | 310 | IPR027469 | - | |
Rops8g04315 | 389 | Coils | Coil | 320 | 340 | - | - | |
Rops8g04315 | 389 | MobiDBLite | consensus disorder prediction | 202 | 218 | - | - | |
Rops8g04315 | 389 | Pfam | Cation efflux family | 62 | 311 | IPR002524 | GO:0006812|GO:0008324|GO:0016020|GO:0055085 | |
Rops8g04315 | 389 | PANTHER | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER | 14 | 389 | - | - | |
Rops8g04315 | 389 | SUPERFAMILY | Cation efflux protein cytoplasmic domain-like | 317 | 388 | IPR036837 | - | |
Rops8g04315 | 389 | MobiDBLite | consensus disorder prediction | 194 | 221 | - | - | |
Rops8g04315 | 389 | NCBIfam | cation diffusion facilitator family transporter | 59 | 389 | IPR002524 | GO:0006812|GO:0008324|GO:0016020|GO:0055085 | |
Rops8g04315 | 389 | SUPERFAMILY | Cation efflux protein transmembrane domain-like | 56 | 312 | IPR027469 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g04315 | Rops-Chr8 | 86142753 | 86147393 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g04315 | 9 | 389 | Inorganic Solute Cotransporters | AT2G46800 | 69.750 | 5.80e-177 | 496 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g04315 | K14689 | - | gmx:100790458 | 543.888 |