Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04287 ATGAGTGGTGGGGAGAAGAGTCTAAAGGGGTTTCATTTGCATCGAACGCATCACCATAACCACCACCAACACCATGGGAAGAAGCAAGAGTTCAGAGGTGTACCAAAAGGGTGTCTAGCAATCAAGGTGGGTCAAGGAGAAGAGCAACAAAGGTTCGTGGTGCCTGTTGGATACTTCAATCACCCCCTCTTCATGCAGCTTCTCAAGGAGGCAGAAGAAGAATATGGGTTTGATCAGAAGGGAACCATAACCATCCCTTGTCATGTGGAAGAGTTCAGGAATATACGAGGCATGATTGATAGGGAAAAATCTCTCCATCACCACCTTCATGTTGGTTGCTTTGGCTTCTAA 351 0.4644 MSGGEKSLKGFHLHRTHHHNHHQHHGKKQEFRGVPKGCLAIKVGQGEEQQRFVVPVGYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNIRGMIDREKSLHHHLHVGCFGF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04287 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 94 IPR003676 GO:0009733
Rops8g04287 116 Pfam Auxin responsive protein 25 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04287 Rops-Chr8 85731787 85732137 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04287 34 112 Calmodulin-binding Proteins AT5G20810 48.750 8.17e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04287 K14488 - cave:132187600 187.963