Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04282 ATGGCTTCAAATTCCAAAACTTTTACATTTGAGGAGGTGGCCAAGCACAACAACAAAAGCGATTGCTGGCTCATTATCAATGGAAAGGTGTATGATGTCACCCCATTTTTGGATGATCATCCAGGAGGTGATGAATCCTTACTGACGGCAACAGGCAAGGATGCCACAGTTGATTTTGAAGATGTGGGCCACAGTGACTCTGCAATAGAAATGATGGAAAAATACTTGGTTGGTAAGGTTGACACCACCACCCTTCCAGCCAAAGTTAACAACAGTCCACCACCTCCTACACAAGCACGTGGAGTTAGCAATCAATCGTCATCAGGATTTGTTGCAAAGATTTTGCAATTTCTATTGCCATTGCTGATGTTGGGCTTTGCATATGCTATGCAATACTATGGCAAAAAGAAACAAGTCAGCAACTCATGA 429 0.4266 MASNSKTFTFEEVAKHNNKSDCWLIINGKVYDVTPFLDDHPGGDESLLTATGKDATVDFEDVGHSDSAIEMMEKYLVGKVDTTTLPAKVNNSPPPPTQARGVSNQSSSGFVAKILQFLLPLLMLGFAYAMQYYGKKKQVSNS* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04282 142 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Rops8g04282 142 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Rops8g04282 142 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Rops8g04282 142 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Rops8g04282 142 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Rops8g04282 142 FunFam Cytochrome b5 type B 2 85 - -
Rops8g04282 142 SMART Cyt_b5_2 8 81 IPR001199 -
Rops8g04282 142 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 87 IPR036400 -
Rops8g04282 142 PANTHER CYTOCHROME B5 3 135 - -
Rops8g04282 142 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Rops8g04282 142 Gene3D - 2 84 IPR036400 -
Rops8g04282 142 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04282 Rops-Chr8 85646793 85650597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04282 1 141 NADPH P450 reductases AT5G48810 55.319 4.01e-56 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04282 K23490 - gmx:100788796 223.787