Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04210 ATGGGATACAATGAGGAGAAATCTACCAAGACTGAAAAGCCTTCTTCACCTGTAACAATGGATCAGACCAACCAGACCAATATTCATGTCTATCCCGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCAGCTGTGGCTTCTGGGCATACTCCTCACCCTTACATGTGGGGGCCACCACAGCCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATTCACATGGAGGGGTTTATACTCACCCTGCAGTTCCTATTGGGCCACATCCACATAGTCAAGGAATTCCATCTTCACCTGCTGCTGGGACTCCTTTAAGCATAGAGACACCTCCCAAATCATCTGGAAATACTGATCAGGGTTTGATGAAGAAATTGAAAGGATTTGATGGACTTGCAATGTCAATAGGCAATGGCCATGCTGAGAGTGCAGAGCGTGGAGCTGAAAACAGGCTATCACAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAACTGAAATACAAGGTAGTCCAGTTTCCAAAGAAATCGCAGCTTCTAACAAGATGATGCCAGTTGCCCCTGCCAGTGTTGCAGGACAATTAGTTGGACATGTAGTTTTTGCTGGTATGACAACTGCACTAGAGCTGAGAAATCCTTCGAGTGTTCATTCTAAAACAAATCCCACAAGTGCCTCGCAACCTTGTGCTGTATTGCCTGCAGAAGCTTGGTTACAGAATGAGCATGAGTTGAAGCGTGAGAGGAGGAAACAGTCAAATCGAGAATCTGCCAGGAGGTCCAGACTAAGGAAGCAGGCTGAGACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATGTTGAGAATGTGTCACTGAAATCAGAAATAAATGGACTGACTGAAAGTTCTGAAAAACTGAGGGTGGAAAATGCCACGTTAAAGGAAAAGCTTAAGAATGCTCAACTGGAACAATCAGAGGTGAGAATTTTGAACGGCATTGACAGCCAGAGGGCAACACCTGTAAGTACAGAGAACTTACTATCAAGAGTCAATAATTCCGGTTCTAATGATAGGACTGCAGATGATGAGAATGATTTTTGTGACAAAAAACCAAACTCTGGTGCAAAGCTGCATCAACTCCTGGATGCTAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1272 0.4544 MGYNEEKSTKTEKPSSPVTMDQTNQTNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHTPHPYMWGPPQPMMPPYGPPYAAIYSHGGVYTHPAVPIGPHPHSQGIPSSPAAGTPLSIETPPKSSGNTDQGLMKKLKGFDGLAMSIGNGHAESAERGAENRLSQSVDTEGSSDGSDGNTSGANQTRRKRSREGTPTTDGEGKTEIQGSPVSKEIAASNKMMPVAPASVAGQLVGHVVFAGMTTALELRNPSSVHSKTNPTSASQPCAVLPAEAWLQNEHELKRERRKQSNRESARRSRLRKQAETEELARKVESLNVENVSLKSEINGLTESSEKLRVENATLKEKLKNAQLEQSEVRILNGIDSQRATPVSTENLLSRVNNSGSNDRTADDENDFCDKKPNSGAKLHQLLDASPRADAVAAG* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04210 423 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 285 300 IPR004827 GO:0003700|GO:0006355
Rops8g04210 423 Pfam Disordered region downstream of MFMR 129 259 - -
Rops8g04210 423 MobiDBLite consensus disorder prediction 158 184 - -
Rops8g04210 423 MobiDBLite consensus disorder prediction 279 306 - -
Rops8g04210 423 Pfam bZIP transcription factor 278 340 IPR004827 GO:0003700|GO:0006355
Rops8g04210 423 MobiDBLite consensus disorder prediction 151 213 - -
Rops8g04210 423 MobiDBLite consensus disorder prediction 107 131 - -
Rops8g04210 423 MobiDBLite consensus disorder prediction 96 133 - -
Rops8g04210 423 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 389 IPR044827 GO:0003700|GO:0006355|GO:0043565
Rops8g04210 423 MobiDBLite consensus disorder prediction 1 24 - -
Rops8g04210 423 MobiDBLite consensus disorder prediction 377 423 - -
Rops8g04210 423 SMART brlzneu 278 342 IPR004827 GO:0003700|GO:0006355
Rops8g04210 423 FunFam G-box binding factor 3 281 336 - -
Rops8g04210 423 Coils Coil 305 353 - -
Rops8g04210 423 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 280 343 IPR004827 GO:0003700|GO:0006355
Rops8g04210 423 SUPERFAMILY Leucine zipper domain 281 336 IPR046347 GO:0003700|GO:0006355
Rops8g04210 423 CDD bZIP_plant_GBF1 283 331 IPR045314 GO:0003700|GO:0006355
Rops8g04210 423 Gene3D - 281 335 - -
Rops8g04210 423 MobiDBLite consensus disorder prediction 386 402 - -
Rops8g04210 423 Pfam G-box binding protein MFMR 1 96 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04210 Rops-Chr8 84550957 84556914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04210 9 423 bZIP Transcription Factor Family AT2G46270 49.642 3.09e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops8g04210 MFMR_assoc 5.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04210 K09060 - gmx:778133 702.59