Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04196 ATGGACAAGACTCAAATGCCTGAGGTTTTCACCTCCCATCACCATTGGTATTCATCCACCATTAGTTCCCTTAACTCAATAGACTTCAATACCACCTCTCCACATGACAATGACAATGCCAATCCCTCCATTTTGTACTCCTACGGCAGTGCACTTCACGGGTTCAGTATCACCTTGACACCAAACGAGTTGGAGATTTTAAAACAAACCTCAGGGTTCATCTCAGCTTATAAGGACAGAGAAACCATGCTTGACACCACAGAGAGTTATAGGTTCCTCTCTCTTAACCATTCCCATGGCCTCTGGCCAGCTTCCAATTATGGTGAAAACGTCACCGTTGGCATTATTGATTCTGGAATTTGGCCAGAGAGTGATAGCTTCAAAGATGATGGCATGATAAATATTCCTTCTGGGTGGAAGGGAACATGCGAGGCTGGAGAGGAATTTGATCCCTCCTTTTGTAACAACAAACTCATAGGTGCAAGACACTTCAATAAGGGTGTTCTTGCTGCTCAAGGTGGTGACACTAAAATTGGCATGAACTCTGTAAGAGACACCATGGGACATGGTACTCACACTTCTTCTACTGTTGCTGGCAACTATGTAAAAGGTGCATCTTTTTTTGGTTATGCTAAAGGAACAGCAAGAGGAATTGCACCACGTGCAAGGATAGCTATATACAAGGTTGCTTGGCGCGAAGGGTTATATGCCTCTGATGTTCTTGCAGGTATGGATCAAGCAATTGCTGATGGGGTTGACGTGATTTCTATCTCAATGGGGTTTGATAGAGTGCCATTGTATGAGGACCCTATAGCCATAGCTGCTTTCTCTGCCATGGAGAAAGGTGTTGTGGTTTCAACTTCAGCAGGAAACGCAGGTCCAGCACTTGGGTCACTACACAATGGGATCCCTTGGGTTTTAACAGTTGGAGCAAGCAACACAGAACGTTCTTTTGGAGGTACTTTAATTCTTGGAAATGGGAAGAGCTTTGTGGGATGGACACTGTTCCCAGCAAGTGCCACAGTAAAAGACCTTGCTTTAGTTTACCATAAGAATATCTCAGCATGTGACTCTTCTAAACTATTATCAAAAGTAGCAGGTGGCAGCATTGTTATATGTGATCTCGTTATGGATGTTGAGGAGCAGATTGATCATGTGTCAGCATCTAAAGTGTTTGGGGCTATATTTATCTCCAGTGATCCAAGACTCTTTGAAATGGGAATAAGAATGACATGCCCTGGTGTTGTGATTAGCCCAGAAGATGGAAAAGCTGTGATCCAATATACACAAAGGACTCCACACCCTTCAGCCACTATAAAGTTTCAACAAACCTTTGTTGGAACAAAGCGTGCTCCTACAGTGGCTACCTACAGTTCAAGAGGCCCTTCTTGGAGCTGTCCATCAGTATTGAAGCCAGATGTGATGGCCCCTGGATCATCAATACTGGCAGCTTGGATTCCAGATTCACCAGTTGCCCAAATTGGCTCAAATGTGTTCTTGAGTAATGAACATAGTTTATTGACAGGGACTTCCATGGCTTGTCCTCATGCTTCTGGGGTGGTGGCTCTCTTGAAAAATGTACAACCTGAATGGAGTGCTTCTGCTATTAGGTCTGCACTCACAACCACAGCCAACCCATTGGATAATATTGGAAAGCCTGTTGAAGAGAATGGTGAAGATCCTAAACCAGCTTCTCCTTTAGCCATGGGAGCTGGTCAGATTGATCCTAATCGAGCTCTTGACCCTGGTTTGGTTTATGATGTGACCCCTCAAGATTATGTCAACCTTCTTTGTGCCATGAATTTGACACAAAACCAAATCTTAGCCATTACTAGATCAAAAGCCTATAATTGCTCAGAGTCATCTTATGACCTCAATTACCCTTCTTTCTTAGCTTTCTATGTCAATGAGAGTGTAGCAGTGGAGAGAAAATTCAGGAGAACTGTGACTAATGTTGGAGATGGTCCAGCTGTTTACACGGCAAGGGTGAGCTCGTTAAATGGCACAGTATCTCCCAATAAGCTTGTCTTCAAGAGAAAATATGAGAAACGGAGCTTCACTTTCACATTGAAGTCTCAAATGGACAAGAAAAGTTTTGTGGCTTATGGTGCACTCGAATGGATTGAAGAAACAGGAAGGCATACTGTTAGAAGTCCCATTGTAGTGGTACCAATGAACGCTGTCTCCAACTCCGAATGTGGGATTTGTGTGTAG 2214 0.4363 MDKTQMPEVFTSHHHWYSSTISSLNSIDFNTTSPHDNDNANPSILYSYGSALHGFSITLTPNELEILKQTSGFISAYKDRETMLDTTESYRFLSLNHSHGLWPASNYGENVTVGIIDSGIWPESDSFKDDGMINIPSGWKGTCEAGEEFDPSFCNNKLIGARHFNKGVLAAQGGDTKIGMNSVRDTMGHGTHTSSTVAGNYVKGASFFGYAKGTARGIAPRARIAIYKVAWREGLYASDVLAGMDQAIADGVDVISISMGFDRVPLYEDPIAIAAFSAMEKGVVVSTSAGNAGPALGSLHNGIPWVLTVGASNTERSFGGTLILGNGKSFVGWTLFPASATVKDLALVYHKNISACDSSKLLSKVAGGSIVICDLVMDVEEQIDHVSASKVFGAIFISSDPRLFEMGIRMTCPGVVISPEDGKAVIQYTQRTPHPSATIKFQQTFVGTKRAPTVATYSSRGPSWSCPSVLKPDVMAPGSSILAAWIPDSPVAQIGSNVFLSNEHSLLTGTSMACPHASGVVALLKNVQPEWSASAIRSALTTTANPLDNIGKPVEENGEDPKPASPLAMGAGQIDPNRALDPGLVYDVTPQDYVNLLCAMNLTQNQILAITRSKAYNCSESSYDLNYPSFLAFYVNESVAVERKFRRTVTNVGDGPAVYTARVSSLNGTVSPNKLVFKRKYEKRSFTFTLKSQMDKKSFVAYGALEWIEETGRHTVRSPIVVVPMNAVSNSECGICV* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04196 737 CDD PA_subtilisin_like 321 439 - -
Rops8g04196 737 CDD Peptidases_S8_3 84 545 IPR034197 -
Rops8g04196 737 ProSiteProfiles Serine proteases, subtilase domain profile. 89 580 - -
Rops8g04196 737 ProSitePatterns Serine proteases, subtilase family, serine active site. 509 519 IPR023828 -
Rops8g04196 737 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 722 IPR045051 -
Rops8g04196 737 FunFam Subtilisin-like protease SBT1.5 110 323 - -
Rops8g04196 737 Pfam Peptidase inhibitor I9 4 81 IPR010259 -
Rops8g04196 737 Gene3D Peptidase S8/S53 domain 110 593 IPR036852 GO:0004252|GO:0006508
Rops8g04196 737 Gene3D - 597 724 - -
Rops8g04196 737 PRINTS Subtilisin serine protease family (S8) signature 508 524 IPR015500 -
Rops8g04196 737 PRINTS Subtilisin serine protease family (S8) signature 185 198 IPR015500 -
Rops8g04196 737 PRINTS Subtilisin serine protease family (S8) signature 108 127 IPR015500 -
Rops8g04196 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 84 IPR037045 -
Rops8g04196 737 MobiDBLite consensus disorder prediction 547 572 - -
Rops8g04196 737 FunFam Subtilisin-like protease SBT1.9 1 85 - -
Rops8g04196 737 SUPERFAMILY Subtilisin-like 92 584 IPR036852 GO:0004252|GO:0006508
Rops8g04196 737 Gene3D - 315 446 - -
Rops8g04196 737 Pfam Subtilase family 108 552 IPR000209 GO:0006508|GO:0008236
Rops8g04196 737 Pfam Fibronectin type-III domain 624 722 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04196 Rops-Chr8 84384172 84386385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04196 1 710 Subtilisin-like Serine Gene Family AT5G67090 42.387 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04196 - - ccaj:109796640 1104.74