Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04191 ATGAGTTGCTTTCCGTGTTTTACCAAGACTAAGAAAAGTAATAGCAAGAGGGAGCAAGGGGCTACCCCGCAGGAAAATGTTATAACAAGAACACCAGATATAAAGAAACAAAAGCCAGATGACCCTAACCAAGTTGACACTTCAAATATTCAAGCACAAAATTTCACTTTCCGTGAGTTAGCAATTGCAACCAAAAATTTCCGCCAAGAGTGCTTGATGGGTGAAGGTGGCTTTGGCAGAGTTTACAAGGGAACAGTTCCAGCAACCGGGCAGGTGGTAGCTGTGAAACAACTCGACAGAAACGGGGGACAAGGCAGCAAGGAATTCCTGGTTGAGGTTTTGATGTTAAGTCTCTTGAACCATGAAAATTTGGTCAAACTCACTGGTTATTGTGCTGATGGGGATCAACGTCTTTTGGTGTATGAATTCATGCCAGGGGGCTCTCTAGAAAGTCGTCTTCTTGATCGGGGACCTGATGAATCTCCATTAGATTGGTACAGCAGAATGAAAATAGCATCCAATACTGCAAAAGGACTATGGTACTTGCATGACAAGGCCAATCCCGCAGTTATATACCGGGACTTGAAATCCGCTAACATCTTGTTGGACAATGATTTAAATGCAAAACTATCTGATTATGGATTGGCCAAACTTGCTGGTAAAGATAAGATGAATATCGTGCCTACAAGAGTCATGGGTACCTATGGTTACAGTGCTCCAGAGTATGTAAGAACAGGTAACCTCACCTTGAAATCAGATGTGTACAGTTTTGGGGTTGTCTTGCTAGAGCTCATAACTGGACGAAGAGCCGTTGACACCACAAGACCACCCGACGAGCAAAATCTAGTTTCATGGGCACAACCCATATTCAGGGACCCAAAAAGATATGCAGATATGGCAGATCCAAATCTGGACAAAAATTTCCCAGAAAAGGATCTGAATCAAGTTGTTGCAATTGCAGCCATGTGCTTGCAGGAGGAAGCAGCAGCACGTCCTTTGATGAGTGATGTTGTAACTGCCCTGAGTTTTCTTTCCGTGTCTCCTCCAAAGGATGCTCCTGCCCCTCCCCCACCTACCACTGCTGCAGGTAAAAGTGAAAGTGAGAGTGAGAGTGAAAGTGATAAGGACAGCCATAGTTCCGATGATGATAACAAAACTGCTCAAAATCAGGTTGCAGCTAGAGAAAAATACCAAGAAAATGAGGATGCTTCAGATGCTGAATATGATTATTATGAGAATGAGAATCATCATGATTATAGTCCACAAGATGCTATACAAACCAAGGAGTTTTACTCCAAATCAAGCCGTAAAAGCAGCACCAAACCAAGGAATGGAAGCAGAAGCAGAAGCAGCTCTAGTTCAGGTTCAGAAAATGGAAGCAGCCACAAAAGCCATAGGAAAAAGCATGGTAAGGGGAGTTTAGGCCAGAAGAGCAGCAAGAAATCAGATTTAAGCCAGAAGAGGAATAAGAAATCTTCTGTCAGAGTTTTAAGCCACAAGGAATCCGAGGATGGAAGCCATTCATCCCATTCCAGTAGCAGCGATGGAGGAGGTGTTGTTTTTGAGCGTGGTGATAGCAGGCCATCAGAAGGAAATGTATCTTTTGGCCTTATCAGCAGTGAGAGTGGGAGCAGCACACATTCAGGTCTCAATCATCCCAGCATGGGATACGATGATGGAAGTTTTCACCATTTCGACCATTTAGATGAAGCAAGTGTTCGTTCACGATAA 1731 0.4367 MSCFPCFTKTKKSNSKREQGATPQENVITRTPDIKKQKPDDPNQVDTSNIQAQNFTFRELAIATKNFRQECLMGEGGFGRVYKGTVPATGQVVAVKQLDRNGGQGSKEFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMPGGSLESRLLDRGPDESPLDWYSRMKIASNTAKGLWYLHDKANPAVIYRDLKSANILLDNDLNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAVDTTRPPDEQNLVSWAQPIFRDPKRYADMADPNLDKNFPEKDLNQVVAIAAMCLQEEAAARPLMSDVVTALSFLSVSPPKDAPAPPPPTTAAGKSESESESESDKDSHSSDDDNKTAQNQVAAREKYQENEDASDAEYDYYENENHHDYSPQDAIQTKEFYSKSSRKSSTKPRNGSRSRSSSSSGSENGSSHKSHRKKHGKGSLGQKSSKKSDLSQKRNKKSSVRVLSHKESEDGSHSSHSSSSDGGGVVFERGDSRPSEGNVSFGLISSESGSSTHSGLNHPSMGYDDGSFHHFDHLDEASVRSR* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04191 576 MobiDBLite consensus disorder prediction 481 508 - -
Rops8g04191 576 MobiDBLite consensus disorder prediction 367 383 - -
Rops8g04191 576 CDD STKc_IRAK 73 341 - -
Rops8g04191 576 PANTHER OS07G0668900 PROTEIN 3 350 - -
Rops8g04191 576 FunFam probable serine/threonine-protein kinase RLCKVII 39 143 - -
Rops8g04191 576 SMART serkin_6 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04191 576 MobiDBLite consensus disorder prediction 425 459 - -
Rops8g04191 576 MobiDBLite consensus disorder prediction 532 552 - -
Rops8g04191 576 Pfam Protein kinase domain 69 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04191 576 FunFam Serine/threonine-protein kinase PBS1 144 355 - -
Rops8g04191 576 ProSiteProfiles Protein kinase domain profile. 67 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04191 576 MobiDBLite consensus disorder prediction 395 423 - -
Rops8g04191 576 Gene3D Phosphorylase Kinase; domain 1 29 143 - -
Rops8g04191 576 MobiDBLite consensus disorder prediction 559 576 - -
Rops8g04191 576 Gene3D Transferase(Phosphotransferase) domain 1 144 349 - -
Rops8g04191 576 MobiDBLite consensus disorder prediction 1 47 - -
Rops8g04191 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Rops8g04191 576 SUPERFAMILY Protein kinase-like (PK-like) 53 371 IPR011009 -
Rops8g04191 576 MobiDBLite consensus disorder prediction 347 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04191 Rops-Chr8 84349550 84352360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04191 1 375 Glycoside Hydrolase AT3G07070 60.459 2.96e-166 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Rops8g04191 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04191 - - gmx:100790911 744.962