Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04188 ATGAAGAAAGTGACAGAAAATTGTTTTGGCAAGCCAGGATCATGGACAAAACTCCTCTTTAGTGTGCTAGTAGGTGTCCTTGCAATATTGCTTCTTGTTCTTCTGATAAAATGCATGTCCAAGAAGATGCCTCGTAAACCTGCACACTTGAAAGAGATTGCTACCTGGTCTGGATTATACTGGTTCACCAAAGCTGAAATTGAGAAGGCAATGAATCATGACAATGAAAAGATAAGCCTTGGACGTGGGAGTGCAGGCCAGGTGTATAGAGGGGTTCTTCCCAGTGGTCAAGTTGTGGCCATCAAGCATTTAACAAAGAGTAAAACTTCTGATTCCTTCACTCGAGAACTTGCAGGACTTTCGAGGCTTCGTCACCCAAACCTGGTTTGTCTATTCGGCAGTTGCATAGAAGATGGCGAAAGATATTTAGTCTATGAATATTGTGCAAACGGAAATCTAGCTCAACACCTCTTGAGAAGAGACAGCCATTTAACATGGGAAACAAGAGTCAGGATTTTGAGAGAGTGTTCATTCGCACTCAAGTATCTCCACCATCATATAGAGGGTTGTGTTGTCCATAGAGATATTAAGCTTACGAACATCCTTTTGACTCAGCAATACGAAGCCAAACTATCAGATTTTGGATTGGCAAAGATGATGGGGATGGAAGAGAGTAAGGTTTTTACTGATGTTAGAGGAACCATTGGCTATATGGATCCTGAGTACATGAGTAATGCCAAGCTAACCTGTGCCAGTGATATATACAGTTTTGGTATTGTTGCTTTGCAAATTCTGTCAGGACAGAAAGTCATAGAATTGGATCTTGATGCCAGAGATCAGCTCACTAGGAAGGCAAGAGATGTGAGTATGGGAAAGCGTCCACTATCTGATTTTGAAGACCCAAGGTTAAATGGACAGGTTGATAAGGCTGACTTTGGAGCCATCTTACAGATTGCAGTGTTGTGTGTTGCCAAATCAAGCACAGGTCGTCCAACCATTGAGGTTGTTTTTGATGAATTGGACAGGATCTACAGGGAAATGCTTGCACGGATGAAAGCAAAGCAGGATGCAAGCTCATCAACAACATCCACCCCCAGCTCCAAGTCCTCAAAATCCTCTTAG 1122 0.426 MKKVTENCFGKPGSWTKLLFSVLVGVLAILLLVLLIKCMSKKMPRKPAHLKEIATWSGLYWFTKAEIEKAMNHDNEKISLGRGSAGQVYRGVLPSGQVVAIKHLTKSKTSDSFTRELAGLSRLRHPNLVCLFGSCIEDGERYLVYEYCANGNLAQHLLRRDSHLTWETRVRILRECSFALKYLHHHIEGCVVHRDIKLTNILLTQQYEAKLSDFGLAKMMGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDIYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLSDFEDPRLNGQVDKADFGAILQIAVLCVAKSSTGRPTIEVVFDELDRIYREMLARMKAKQDASSSTTSTPSSKSSKSS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04188 373 MobiDBLite consensus disorder prediction 352 373 - -
Rops8g04188 373 Gene3D Phosphorylase Kinase; domain 1 46 147 - -
Rops8g04188 373 ProSiteProfiles Protein kinase domain profile. 74 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04188 373 MobiDBLite consensus disorder prediction 354 373 - -
Rops8g04188 373 SMART serkin_6 74 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04188 373 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 362 - -
Rops8g04188 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Rops8g04188 373 Gene3D Transferase(Phosphotransferase) domain 1 148 368 - -
Rops8g04188 373 SUPERFAMILY Protein kinase-like (PK-like) 53 339 IPR011009 -
Rops8g04188 373 FunFam probable receptor-like protein kinase At5g59700 148 359 - -
Rops8g04188 373 Pfam Protein kinase domain 79 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04188 Rops-Chr8 84341672 84343224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04188 50 343 Receptor kinase-like Gene Family AT5G66790 38.889 1.69e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Rops8g04188 Pkinase 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04188 - - vum:124837890 564.688