Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04165 ATGGCACTTCGAAGCCACATGATCGAGATAGAAAACGGAGTTGACATCGTTGATACCTTGATTCAGTTTTCGAGAAGGCACCATAGTGGTGTTTGTGTTTTCAGCGCCACTGGCAATGTTAGTCACGTCACACTCCGGCAACCCACTCTCCCCAACGCTGTCATTGCTCTTCACGGTCGTTTTGGAATTATATCGTTGACAGGTTCGTTGCTTCCGGGACCGTCCCATCCCGGCTCCACCAGACTAACCATTTACATGTCCGGATCTCAGGGACCAGTTGTTGGCGGCGAAGTGGTGGTGGGTCCCCTGGTGGCATCAGGACCGGTGATGATAATGGCGGCAACGTGTTCCCATGCTATATATGAGAGGTTACCCTTGTCGGTTGAGGACGACGAAGATCAGGTTGCTCCACAACATTTGGTTGCTCCAAACGGCCAACAATAG 444 0.5158 MALRSHMIEIENGVDIVDTLIQFSRRHHSGVCVFSATGNVSHVTLRQPTLPNAVIALHGRFGIISLTGSLLPGPSHPGSTRLTIYMSGSQGPVVGGEVVVGPLVASGPVMIMAATCSHAIYERLPLSVEDDEDQVAPQHLVAPNGQQ* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04165 147 CDD DUF296 4 90 IPR005175 -
Rops8g04165 147 Gene3D - 3 133 - -
Rops8g04165 147 Pfam Plants and Prokaryotes Conserved (PCC) domain 4 116 IPR005175 -
Rops8g04165 147 ProSiteProfiles PPC domain profile profile. 1 138 IPR005175 -
Rops8g04165 147 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 135 IPR014476 GO:0003680
Rops8g04165 147 SUPERFAMILY AF0104/ALDC/Ptd012-like 3 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04165 Rops-Chr8 83936610 83937053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04165 2 131 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 59.231 9.28e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04165 - - qsu:112038015 164.466