Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04160 ATGGCGAACCCGTGGTGGACCGATTCGGTTGGTCTCATGGGTGTTGACAACTCTTCTCCCCCAATGAAAAAACCCGATCTATCCACTGGCGGAGGAGAAGAGGAGAAAGAAAACGGGGGCGAGGAGGAGGCTAAAGATGTGGGCCCCACGCGCCGGTCCAGGGGCCGCCCACTGGGCTCCAAGAACAGGCCCAAACCGCCGGTGTTCGTGACCAGAGACGGCCCAAATGCACTTCGAAGCCATGTCATAGAGATAGCAAACGGAGCTGACATCGCTGATTGCTTGCTTCAGTTTTCCAGAAGGCGTCAGAGTGGTGTCTGTGTTCTCTCCGCCACCGGCACAGTCACCAACGTCACTCTCCGGCAACCCACCTTCCCCGGCGCCGTCATGGCTCTTCCCGGCCGGTTCGATATAATATCGTTGACCGGTTCGTTTCTTCCCGGACCGTCTCCACCTGGCTCCACCGGATTAACCGTTTACATGGCCGGATCTCAGGGACAAGTGGTGGGCGGCGGCGTGGTGGGTCCCCTGGTGGCATCAGGAGATGTTATGATAATGGCGGCTATGTTTTCCAATGCTATATACGAGAGATTACCGTTATCGGTTGAGGATGACGAAGATCAGGTGCCAGGTGGTGGAGAGGTTTTGCCGGCGATTGTTCCTCAGAATTTGGTTGTTCCAAACGGACAACAACAGTTGAGTCATGAAGGTTATTCTCCTTTTTCTCATGGCAGGCCCAGGCCACCCTTTTGA 753 0.5564 MANPWWTDSVGLMGVDNSSPPMKKPDLSTGGGEEEKENGGEEEAKDVGPTRRSRGRPLGSKNRPKPPVFVTRDGPNALRSHVIEIANGADIADCLLQFSRRRQSGVCVLSATGTVTNVTLRQPTFPGAVMALPGRFDIISLTGSFLPGPSPPGSTGLTVYMAGSQGQVVGGGVVGPLVASGDVMIMAAMFSNAIYERLPLSVEDDEDQVPGGGEVLPAIVPQNLVVPNGQQQLSHEGYSPFSHGRPRPPF* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04160 250 MobiDBLite consensus disorder prediction 1 74 - -
Rops8g04160 250 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 200 - -
Rops8g04160 250 Pfam Plants and Prokaryotes Conserved (PCC) domain 79 191 IPR005175 -
Rops8g04160 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 210 IPR014476 GO:0003680
Rops8g04160 250 CDD DUF296 79 164 IPR005175 -
Rops8g04160 250 ProSiteProfiles PPC domain profile profile. 75 212 IPR005175 -
Rops8g04160 250 Gene3D - 78 207 - -
Rops8g04160 250 FunFam AT-hook motif nuclear-localized protein 78 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04160 Rops-Chr8 83812570 83813322 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04160 1 246 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 53.381 1.70e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04160 - - aprc:113873404 269.24