Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04157 ATGGTAGGTGGAGTTCAGAGACTGCACGATGGAGAGTTTATTGTTCAAGCTACAAAAGATTGTGTTGCCAAGATGTTGAAAAGATTAGAGGAGAAGATTCACGGCCATGTGCTGAACCATTTGTTATATCTTATGCAAGTTTCAGAAGAAGGTTCTCAAAGGCAAGTTGCTTTGGCTCTTGCACATCTTTGTTCTGCAGATGATCAGAGAAGAATTTTTATTGATAACCATGGTCTTGAGTTGCTTATTGGGCTTCTTGGCTCATCTAGCCCTAAGCCACAACTTGATGGTGCCATGGCTTTATGCAAGTTGGCCAATAAAGCCTCAACTCGGTCTCCTGTGGATGCTGTTCCTCCTTCTCCAACACCACAGGTCTATTTAGGAGAGCAGTATGTAAACAATGCTACATTGTCCAGCGTTACATTTTTGGTTGAAGGCAAACGATTTTATGCTAATAGGATTTGTCTCCTTGCATGTTCAGATGCATTTTGTGCAATGTTTGATGGTAGTTATAGGGAGAAGGAAGCCAGGGACATAGTGATTCCAAATATTAGATGGGAAGTTTTTGAGTTGATGATGAGATTTATATATACTGGATCAGTCGATGTCACTCCAGATGTTGCTCAAGATCTTCTTCGAGCAGCTGATCAATATCTTATAGAAGGACTTAAGAGACTCTGTGAGCACACGATTGCACAGGATATATCGCTAGAGAATGTGTCAAATATGTATGAACTTTCAGAAGCCTTCAATGCAATATCATTGAGGCACGCCTGCATCCGTTTTATCTTGGAGCAATATGATAAGTTGAGTGGAAGGCCAGGGCACTCTCTTCTTATTCAGCGGATAATTCCAGAGATTCGCAATTACTTTATTGAAGCTCTTACGAAGGCCAACTCCCATGACCGACTGTAG 915 0.4142 MVGGVQRLHDGEFIVQATKDCVAKMLKRLEEKIHGHVLNHLLYLMQVSEEGSQRQVALALAHLCSADDQRRIFIDNHGLELLIGLLGSSSPKPQLDGAMALCKLANKASTRSPVDAVPPSPTPQVYLGEQYVNNATLSSVTFLVEGKRFYANRICLLACSDAFCAMFDGSYREKEARDIVIPNIRWEVFELMMRFIYTGSVDVTPDVAQDLLRAADQYLIEGLKRLCEHTIAQDISLENVSNMYELSEAFNAISLRHACIRFILEQYDKLSGRPGHSLLIQRIIPEIRNYFIEALTKANSHDRL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04157 304 SMART BTB_4 138 235 IPR000210 GO:0005515
Rops8g04157 304 SUPERFAMILY ARM repeat 20 268 IPR016024 -
Rops8g04157 304 Gene3D - 11 114 IPR011989 -
Rops8g04157 304 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 2 299 IPR044282 -
Rops8g04157 304 Pfam BTB/POZ domain 131 233 IPR000210 GO:0005515
Rops8g04157 304 Gene3D Potassium Channel Kv1.1; Chain A 115 265 IPR011333 -
Rops8g04157 304 SUPERFAMILY POZ domain 129 233 IPR011333 -
Rops8g04157 304 ProSiteProfiles BTB domain profile. 138 205 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04157 Rops-Chr8 83727137 83731683 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops8g04157 BTB 2.8e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04157 - - gmx:100784348 511.916