Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04155 ATGTGTGAAGAAACTCTGAAGAAGAAGCAATACCAAGTGTTAGAGGAAATTGGTCATGGAAAATTCGGCACCGTGTTCCGATGCTTTCACACAATTTCAAACCAATTCTATGCATGCAAAGTCATCGACAAGAACCTCCTTAACGATTCCATTGATCGTCAATGCATAGAAAACGAGTCCAAATTCATGACCTTCCTCTCTTCACATCCCAATGTTCTTCAAATCTTTGATACCTTCGAAGACACCAATTTCTCATTCATCATCATCGAGCTTTGCAAATCCATCACCCTCTTGGACCACATCGCCGATGGTCCCTTGCCGGAGCAACAAGCGGCTTCCATCATGAAGCAGCTTCTAGAAGCACTTGCACATTGTCACAGGCTTGGAATAGCACACAGAGACATAAAACCCGACAACCTGTTATTCGATTCGAGGGATAATCTTAAAGTTGCTGACTTTGGTTCTGGGGAGTGGTTCGGTGAGGGAAGGAGCATGAGTGGGGTAGTTGGTACCCCTTATTATGTGGCGCCTGAGGTTTTGATGGGGAGAGAGTACAGTGAGAAAGTTGATGTTTGGAGCAGTGGGGTGATTCTTTATATAATGTTGGCTGGGATTCCACCCTTTTATGGAGACTCTGCTACTGAGATTTTTGAGGCTGTTGTGAGGGCTAATCTAAGGTTTCCCACAAGAATTTTCAGGTCTGTTTCAGCACCTGCTAAGGATCTTCTCAGAAAGATGATTTGTAGGGATCCCTCTAGGCGAATGACCGCAGAGCAAGCCTTGAGGCATCCTTGGATCTTGAGTCGAGGTGTGACTAGTAATCTAACTTGA 831 0.4489 MCEETLKKKQYQVLEEIGHGKFGTVFRCFHTISNQFYACKVIDKNLLNDSIDRQCIENESKFMTFLSSHPNVLQIFDTFEDTNFSFIIIELCKSITLLDHIADGPLPEQQAASIMKQLLEALAHCHRLGIAHRDIKPDNLLFDSRDNLKVADFGSGEWFGEGRSMSGVVGTPYYVAPEVLMGREYSEKVDVWSSGVILYIMLAGIPPFYGDSATEIFEAVVRANLRFPTRIFRSVSAPAKDLLRKMICRDPSRRMTAEQALRHPWILSRGVTSNLT* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04155 276 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Rops8g04155 276 FunFam Aurora kinase A 3 94 - -
Rops8g04155 276 ProSiteProfiles Protein kinase domain profile. 11 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04155 276 SUPERFAMILY Protein kinase-like (PK-like) 7 268 IPR011009 -
Rops8g04155 276 Pfam Protein kinase domain 11 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04155 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Rops8g04155 276 Gene3D Transferase(Phosphotransferase) domain 1 3 274 - -
Rops8g04155 276 PIRSF ILK 2 263 - -
Rops8g04155 276 SMART serkin_6 11 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04155 276 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 269 - -
Rops8g04155 276 FunFam Phosphoenolpyruvate carboxylase kinase 1 95 275 - -
Rops8g04155 276 CDD STKc_CAMK 10 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04155 Rops-Chr8 83686959 83688221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04155 8 272 EF-hand Containing Proteins AT2G38910 42.379 1.34e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops8g04155 Pkinase 7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04155 - K08794 gmx:548089 430.254