Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04098 ATGTCAAGGGTAACCATGCACTCAAAACTAACGGTTGTGTCCAGCAAACCTGTGAGTTCGGGTAAGACCCATACCCTATCGGCTTTGGATCAGGCAATGGGTTTCCATACTCTTCATATGATATTATACTACAAGAACAAGGACAACTTGTGTGAGTCTTTTGAATTGGACCCGTTGAGGGAGTCATTGTGTGAGGTTCTTACAATGTACCCGACAATGACGGGTCGGTTGGCCCGAGGGGTGGATGGTAATTGGGAAGTTAGGTGCAATGATGCGGGTGTTCGGGTCATAAGGGCTGATGTGGATACCACTCTCGATGAATGGCTTTCATCTGCTTCTGCATCTGAAGAGGCAAGTCTGATAGCTTGGGATCATATGCCTGATGAACCTAATACGTGGTCTCCCTTTCGAATTCAGATAAACAGCTTCGAAGAAGGAGGTATTGCAATAGGATTAAGTTGTAGCCACATGCTTGCTGATCTAACTTGTGCAGCCTCATTCTTCAAATCATGGACAGAAGTTCACCGCCACTTGCCCATTACCTACCCTCCATTCTTCATTCCAATTCGTGCTTCACCAATTCAAAATGTGGATGCAAAGTATGCAAACATGTCACCAACAAAAGCACAATCACCATCTTCTACAAATATGGCCACAGCCACTTTCAAGTTTTCAAGTTCAATTATCAAGCAATGCCTTTCCAAACTCCAAGACACATGTCCCAAGGCCACCCCATTTGACTTCCTTTCAGCTTTATTTTGGACTCGGATATTTCACTTGAAGCCTCAAAAAAATCACGACCAAACTCACTCTCTATCCATCTGCACTGACTTCAGGAAGCTCCTTAAACCTTCCCTCCCTATTGGGTATTTTGGCAATGCATTACATTTTTCAATGCTTTCACTCAAAGTGGAAGACATGGAGAGTGACCAATTAGGAGATATAGCTAGTCTAATACATAAGCACTTGGCAGGGCTTACAGAGGAGGAAATATGGTCTTCCATACATTGGTTTGAGTCACAAAAGGAATTAGAGGGAGGGAAGTTCAAATCATCGAATTGCATGTATGGGACTGAGTTAACTTGTGTTTGCATGGAGCACATGATGATTTCATCAGAACCAAGTAATAAAGTGGAAGAGGCAGAGCAATCTTTGCTATATGCAGCAATGTTTAGCAATGATGAGAAGCCAGTTCATGTTTCATGTCACATGAGGAATGTGGATGGTGAAGGTTTGATTATGGTGATGCCTTCTTTAGAAGGAGGGCTTGCAAGAACAGTGATGGTGATGCTACCAAAGGAAGAACTTGCTCAATTATGCAATGATCAAGCTATATTGCAGCTGGAGCCAACAATGTTACTTGCTGATTCTGTGCTTGGAAATTGA 1386 0.4293 MSRVTMHSKLTVVSSKPVSSGKTHTLSALDQAMGFHTLHMILYYKNKDNLCESFELDPLRESLCEVLTMYPTMTGRLARGVDGNWEVRCNDAGVRVIRADVDTTLDEWLSSASASEEASLIAWDHMPDEPNTWSPFRIQINSFEEGGIAIGLSCSHMLADLTCAASFFKSWTEVHRHLPITYPPFFIPIRASPIQNVDAKYANMSPTKAQSPSSTNMATATFKFSSSIIKQCLSKLQDTCPKATPFDFLSALFWTRIFHLKPQKNHDQTHSLSICTDFRKLLKPSLPIGYFGNALHFSMLSLKVEDMESDQLGDIASLIHKHLAGLTEEEIWSSIHWFESQKELEGGKFKSSNCMYGTELTCVCMEHMMISSEPSNKVEEAEQSLLYAAMFSNDEKPVHVSCHMRNVDGEGLIMVMPSLEGGLARTVMVMLPKEELAQLCNDQAILQLEPTMLLADSVLGN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04098 461 Gene3D - 198 441 IPR023213 -
Rops8g04098 461 Gene3D - 2 197 IPR023213 -
Rops8g04098 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 433 - -
Rops8g04098 461 Pfam Transferase family 3 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04098 Rops-Chr8 82851352 82854617 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04098 35 344 Monolignol Biosynthesis Gene Families AT5G48930 26.006 8.99e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04098 - - lja:Lj1g3v4958860.1 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04098 8 82851352 82854617 Rops8g04098 8 82851352 82854617 ECH