Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04078 ATGGCATCTGAGCAACACGACACCGTTTTCCCCGAAGAAGACATGGACGACGACGACGAATCTCAGGACGACGACGAAGAAGAAGAATTAGAAGAAGAAGACGACATCGACGACGACGACGTTTTGGCCGATGACGAAGAAAACGAAAACGAACCCTCTCCTTCCACCTCCCCCGCTCTCGCCGTCACCGTCGCCGTTCCCGGTTCCGTCATCGCTCCAATTTCAACAACCACCGCCACCACAATCGTCGTCGCCGACTCTCCCGATCCAAAACGACAGCGTGTGGATCAAATCGAAGAGAAAAAACCTTCCGACGATTCACGGAGACTGTTTCAACGATTGTGGACGGACGAAGACGAGATCGAACTCTTACAAGGTTTCCTTGACTACACTTCGCAACGAGGTTCCTCTCATCACAACGACACCGCTTTGTTCTACGATCAAATCAAGTCGAAGCTCCAACTCGATTTCAACAAGAACCAGCTTGTTGAGAAGATCCGAAGGTTGAAGAAGAAATACAGAAACGTTCTCAACAAGATTGGTTCCGGTAAGGAATTTTCCTTCAAGAGCCCTCACGATCAAGCCACTTTTGAAATCTCACGCAAGATCTGGAGTAACGTGGCCCCAATTGCCGTTGAAGATAATAATGTAGCCTTGGATGATGACGAAATCAACCTCAACCCCAACCCTAATTTCAGTCCCTTGGTGCCAAAGAGCGAGGTCAATTCATCTGAGAAGAAAAATCGGAAGCGGTCACGGCCTCGATCATCGGGGATCAGAAGCAATGATGGATCAGCTTCTAACAAAGATCATAATTTTATTAGCAATGCTGCTGCTGCTACTACTATGACTAACACTAACAGTAATTGTTGTAACAGTGGGAATAGTAGCATAGCGGGCTTGATTGAAGAGACCGTGAGGAGTTGTTTGTCGCCGTTGTTGAAGGAATTGGTGGCTGGTGCTATGGGGGGACCCTTTGGGGCAAGAGGGCTTTCGTTGAACCCGGTGGTGCCTTTGATGAATTTGGGTTTTGGGGGTGGGGAAGTGGTGGATGACAAATGGAAGAAGCAACAGATTTTGGAGTTGGAAGTTTATTCGAAGAGGTTGGAGTTGGTTCAGGATCAGATCAAGGCTGCTATAGAGGAATTGCGTTCAACCGGTGGTGGAGGAGGATGA 1176 0.483 MASEQHDTVFPEEDMDDDDESQDDDEEEELEEEDDIDDDDVLADDEENENEPSPSTSPALAVTVAVPGSVIAPISTTTATTIVVADSPDPKRQRVDQIEEKKPSDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFSFKSPHDQATFEISRKIWSNVAPIAVEDNNVALDDDEINLNPNPNFSPLVPKSEVNSSEKKNRKRSRPRSSGIRSNDGSASNKDHNFISNAAAATTMTNTNSNCCNSGNSSIAGLIEETVRSCLSPLLKELVAGAMGGPFGARGLSLNPVVPLMNLGFGGGEVVDDKWKKQQILELEVYSKRLELVQDQIKAAIEELRSTGGGGG* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04078 391 MobiDBLite consensus disorder prediction 226 241 - -
Rops8g04078 391 MobiDBLite consensus disorder prediction 221 270 - -
Rops8g04078 391 MobiDBLite consensus disorder prediction 10 51 - -
Rops8g04078 391 PANTHER BNAANNG10740D PROTEIN-RELATED 15 382 IPR007592 GO:0006355
Rops8g04078 391 MobiDBLite consensus disorder prediction 1 60 - -
Rops8g04078 391 Coils Coil 362 382 - -
Rops8g04078 391 Coils Coil 159 179 - -
Rops8g04078 391 Pfam Protein of unknown function, DUF573 111 205 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04078 Rops-Chr8 82599883 82601429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04078 1 390 GeBP Transcription Factor Family AT5G28040 46.501 2.83e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Rops8g04078 DUF573 3.4e-35 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04078 - - gmx:100779712 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04078 8 82599883 82601429 Rops6g01777 6 35455089 35456375 PCT